Protein–RNA interactions for Protein: Q9NSC5

HOMER3, Homer protein homolog 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3Q9NSC5 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
HOMER3Q9NSC5 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
HOMER3Q9NSC5 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOMER3Q9NSC5 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
HOMER3Q9NSC5 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOMER3Q9NSC5 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.65■□□□□ 0.26
HOMER3Q9NSC5 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
HOMER3Q9NSC5 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.65■□□□□ 0.26
HOMER3Q9NSC5 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.65■□□□□ 0.26
HOMER3Q9NSC5 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.65■□□□□ 0.26
HOMER3Q9NSC5 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.65■□□□□ 0.26
HOMER3Q9NSC5 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.65■□□□□ 0.26
HOMER3Q9NSC5 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.65■□□□□ 0.26
HOMER3Q9NSC5 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.65■□□□□ 0.26
HOMER3Q9NSC5 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOMER3Q9NSC5 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.65■□□□□ 0.26
HOMER3Q9NSC5 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.65■□□□□ 0.26
HOMER3Q9NSC5 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
HOMER3Q9NSC5 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
HOMER3Q9NSC5 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOMER3Q9NSC5 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.65■□□□□ 0.26
HOMER3Q9NSC5 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOMER3Q9NSC5 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOMER3Q9NSC5 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOMER3Q9NSC5 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOMER3Q9NSC5 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.65■□□□□ 0.26
HOMER3Q9NSC5 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOMER3Q9NSC5 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.65■□□□□ 0.26
HOMER3Q9NSC5 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOMER3Q9NSC5 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOMER3Q9NSC5 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOMER3Q9NSC5 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HOMER3Q9NSC5 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOMER3Q9NSC5 AC025580.3-201ENST00000617932 1424 ntBASIC16.64■□□□□ 0.25
HOMER3Q9NSC5 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOMER3Q9NSC5 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.64■□□□□ 0.25
HOMER3Q9NSC5 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.64■□□□□ 0.25
HOMER3Q9NSC5 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOMER3Q9NSC5 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOMER3Q9NSC5 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HOMER3Q9NSC5 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
HOMER3Q9NSC5 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HOMER3Q9NSC5 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HOMER3Q9NSC5 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.64■□□□□ 0.25
HOMER3Q9NSC5 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
HOMER3Q9NSC5 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.64■□□□□ 0.25
HOMER3Q9NSC5 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.64■□□□□ 0.25
HOMER3Q9NSC5 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.64■□□□□ 0.25
HOMER3Q9NSC5 AP001005.1-201ENST00000571755 1248 ntBASIC16.64■□□□□ 0.25
HOMER3Q9NSC5 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.64■□□□□ 0.25
HOMER3Q9NSC5 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.64■□□□□ 0.25
HOMER3Q9NSC5 AL031008.1-201ENST00000619963 541 ntBASIC16.64■□□□□ 0.25
HOMER3Q9NSC5 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.64■□□□□ 0.25
HOMER3Q9NSC5 AC004877.2-201ENST00000623941 599 ntBASIC16.64■□□□□ 0.25
HOMER3Q9NSC5 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.64■□□□□ 0.25
HOMER3Q9NSC5 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOMER3Q9NSC5 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOMER3Q9NSC5 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOMER3Q9NSC5 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOMER3Q9NSC5 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOMER3Q9NSC5 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.64■□□□□ 0.25
HOMER3Q9NSC5 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.64■□□□□ 0.25
HOMER3Q9NSC5 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.64■□□□□ 0.25
HOMER3Q9NSC5 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HOMER3Q9NSC5 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HOMER3Q9NSC5 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOMER3Q9NSC5 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOMER3Q9NSC5 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.64■□□□□ 0.25
HOMER3Q9NSC5 BANP-203ENST00000393207 2438 ntTSL 2 BASIC16.64■□□□□ 0.25
HOMER3Q9NSC5 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOMER3Q9NSC5 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOMER3Q9NSC5 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOMER3Q9NSC5 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.64■□□□□ 0.25
HOMER3Q9NSC5 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOMER3Q9NSC5 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOMER3Q9NSC5 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
HOMER3Q9NSC5 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.63■□□□□ 0.25
HOMER3Q9NSC5 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HOMER3Q9NSC5 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HOMER3Q9NSC5 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOMER3Q9NSC5 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HOMER3Q9NSC5 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
HOMER3Q9NSC5 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HOMER3Q9NSC5 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HOMER3Q9NSC5 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.63■□□□□ 0.25
HOMER3Q9NSC5 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOMER3Q9NSC5 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.63■□□□□ 0.25
HOMER3Q9NSC5 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HOMER3Q9NSC5 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOMER3Q9NSC5 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC16.63■□□□□ 0.25
HOMER3Q9NSC5 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.63■□□□□ 0.25
HOMER3Q9NSC5 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC16.63■□□□□ 0.25
HOMER3Q9NSC5 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC16.63■□□□□ 0.25
HOMER3Q9NSC5 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC16.63■□□□□ 0.25
HOMER3Q9NSC5 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.63■□□□□ 0.25
HOMER3Q9NSC5 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOMER3Q9NSC5 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
HOMER3Q9NSC5 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HOMER3Q9NSC5 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOMER3Q9NSC5 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms