Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19.62■□□□□ 0.73
UPF2Q9HAU5 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19.62■□□□□ 0.73
UPF2Q9HAU5 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UPF2Q9HAU5 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UPF2Q9HAU5 C18orf15-201ENST00000623680 2534 ntBASIC19.62■□□□□ 0.73
UPF2Q9HAU5 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC19.62■□□□□ 0.73
UPF2Q9HAU5 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
UPF2Q9HAU5 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UPF2Q9HAU5 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UPF2Q9HAU5 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC19.61■□□□□ 0.73
UPF2Q9HAU5 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UPF2Q9HAU5 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UPF2Q9HAU5 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UPF2Q9HAU5 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UPF2Q9HAU5 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
UPF2Q9HAU5 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
UPF2Q9HAU5 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.61■□□□□ 0.73
UPF2Q9HAU5 FIS1-203ENST00000442303 631 ntTSL 3 BASIC19.61■□□□□ 0.73
UPF2Q9HAU5 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.61■□□□□ 0.73
UPF2Q9HAU5 CXCL1P1-201ENST00000502804 216 ntBASIC19.61■□□□□ 0.73
UPF2Q9HAU5 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.61■□□□□ 0.73
UPF2Q9HAU5 AL356488.2-201ENST00000602755 427 ntBASIC19.61■□□□□ 0.73
UPF2Q9HAU5 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.61■□□□□ 0.73
UPF2Q9HAU5 AC138969.2-201ENST00000532739 9932 ntBASIC19.61■□□□□ 0.73
UPF2Q9HAU5 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
UPF2Q9HAU5 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC19.61■□□□□ 0.73
UPF2Q9HAU5 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
UPF2Q9HAU5 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UPF2Q9HAU5 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UPF2Q9HAU5 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC19.61■□□□□ 0.73
UPF2Q9HAU5 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
UPF2Q9HAU5 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
UPF2Q9HAU5 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC19.61■□□□□ 0.73
UPF2Q9HAU5 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
UPF2Q9HAU5 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
UPF2Q9HAU5 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UPF2Q9HAU5 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
UPF2Q9HAU5 AC106881.1-201ENST00000605849 3329 ntBASIC19.61■□□□□ 0.73
UPF2Q9HAU5 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
UPF2Q9HAU5 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
UPF2Q9HAU5 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UPF2Q9HAU5 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC19.61■□□□□ 0.73
UPF2Q9HAU5 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
UPF2Q9HAU5 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
UPF2Q9HAU5 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UPF2Q9HAU5 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC19.6■□□□□ 0.73
UPF2Q9HAU5 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UPF2Q9HAU5 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UPF2Q9HAU5 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UPF2Q9HAU5 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
UPF2Q9HAU5 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
UPF2Q9HAU5 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
UPF2Q9HAU5 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC19.6■□□□□ 0.73
UPF2Q9HAU5 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC19.6■□□□□ 0.73
UPF2Q9HAU5 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UPF2Q9HAU5 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UPF2Q9HAU5 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UPF2Q9HAU5 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC19.6■□□□□ 0.73
UPF2Q9HAU5 TSPY19P-201ENST00000418461 509 ntBASIC19.6■□□□□ 0.73
UPF2Q9HAU5 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC19.6■□□□□ 0.73
UPF2Q9HAU5 TSPY18P-201ENST00000441642 509 ntBASIC19.6■□□□□ 0.73
UPF2Q9HAU5 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19.6■□□□□ 0.73
UPF2Q9HAU5 HS6ST1P1-201ENST00000481504 1234 ntBASIC19.6■□□□□ 0.73
UPF2Q9HAU5 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.6■□□□□ 0.73
UPF2Q9HAU5 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.6■□□□□ 0.73
UPF2Q9HAU5 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.6■□□□□ 0.73
UPF2Q9HAU5 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC19.6■□□□□ 0.73
UPF2Q9HAU5 MIR4321-201ENST00000592276 80 ntBASIC19.6■□□□□ 0.73
UPF2Q9HAU5 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC19.6■□□□□ 0.73
UPF2Q9HAU5 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UPF2Q9HAU5 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UPF2Q9HAU5 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UPF2Q9HAU5 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
UPF2Q9HAU5 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
UPF2Q9HAU5 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
UPF2Q9HAU5 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UPF2Q9HAU5 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UPF2Q9HAU5 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC19.59■□□□□ 0.73
UPF2Q9HAU5 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
UPF2Q9HAU5 AC112693.3-201ENST00000624819 1983 ntBASIC19.59■□□□□ 0.73
UPF2Q9HAU5 AC134407.2-201ENST00000625089 1978 ntBASIC19.59■□□□□ 0.73
UPF2Q9HAU5 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UPF2Q9HAU5 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
UPF2Q9HAU5 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
UPF2Q9HAU5 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UPF2Q9HAU5 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
UPF2Q9HAU5 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UPF2Q9HAU5 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UPF2Q9HAU5 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
UPF2Q9HAU5 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
UPF2Q9HAU5 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.59■□□□□ 0.73
UPF2Q9HAU5 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UPF2Q9HAU5 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
UPF2Q9HAU5 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.59■□□□□ 0.73
UPF2Q9HAU5 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.59■□□□□ 0.73
UPF2Q9HAU5 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.59■□□□□ 0.73
UPF2Q9HAU5 AL513480.1-201ENST00000451731 511 ntBASIC19.59■□□□□ 0.73
UPF2Q9HAU5 AC108073.2-201ENST00000464002 357 ntBASIC19.59■□□□□ 0.73
UPF2Q9HAU5 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC19.59■□□□□ 0.73
UPF2Q9HAU5 CFL1-202ENST00000524553 860 ntTSL 2 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms