Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 AC020914.3-201ENST00000594712 304 ntBASIC17.51■□□□□ 0.39
UBE2OQ9C0C9 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC17.51■□□□□ 0.39
UBE2OQ9C0C9 LINC01115-203ENST00000606068 577 ntBASIC17.51■□□□□ 0.39
UBE2OQ9C0C9 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBE2OQ9C0C9 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBE2OQ9C0C9 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.51■□□□□ 0.39
UBE2OQ9C0C9 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBE2OQ9C0C9 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBE2OQ9C0C9 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBE2OQ9C0C9 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBE2OQ9C0C9 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.51■□□□□ 0.39
UBE2OQ9C0C9 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.51■□□□□ 0.39
UBE2OQ9C0C9 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
UBE2OQ9C0C9 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBE2OQ9C0C9 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
UBE2OQ9C0C9 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBE2OQ9C0C9 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBE2OQ9C0C9 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UBE2OQ9C0C9 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
UBE2OQ9C0C9 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
UBE2OQ9C0C9 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBE2OQ9C0C9 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.5■□□□□ 0.39
UBE2OQ9C0C9 LINC00554-201ENST00000564841 3011 ntBASIC17.5■□□□□ 0.39
UBE2OQ9C0C9 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBE2OQ9C0C9 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBE2OQ9C0C9 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBE2OQ9C0C9 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UBE2OQ9C0C9 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBE2OQ9C0C9 AC007969.1-201ENST00000433675 447 ntBASIC17.5■□□□□ 0.39
UBE2OQ9C0C9 C2orf27AP3-201ENST00000434123 579 ntBASIC17.5■□□□□ 0.39
UBE2OQ9C0C9 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.5■□□□□ 0.39
UBE2OQ9C0C9 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
UBE2OQ9C0C9 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC17.5■□□□□ 0.39
UBE2OQ9C0C9 AC012441.1-201ENST00000446669 685 ntBASIC17.5■□□□□ 0.39
UBE2OQ9C0C9 RN7SL769P-201ENST00000469386 295 ntBASIC17.5■□□□□ 0.39
UBE2OQ9C0C9 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UBE2OQ9C0C9 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17.5■□□□□ 0.39
UBE2OQ9C0C9 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC17.5■□□□□ 0.39
UBE2OQ9C0C9 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC17.5■□□□□ 0.39
UBE2OQ9C0C9 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
UBE2OQ9C0C9 NAT9-222ENST00000583476 583 ntTSL 3 BASIC17.5■□□□□ 0.39
UBE2OQ9C0C9 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC17.5■□□□□ 0.39
UBE2OQ9C0C9 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC17.5■□□□□ 0.39
UBE2OQ9C0C9 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC17.5■□□□□ 0.39
UBE2OQ9C0C9 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC17.5■□□□□ 0.39
UBE2OQ9C0C9 AL049840.4-201ENST00000602422 811 ntBASIC17.5■□□□□ 0.39
UBE2OQ9C0C9 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC17.5■□□□□ 0.39
UBE2OQ9C0C9 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.5■□□□□ 0.39
UBE2OQ9C0C9 AL354718.3-201ENST00000616414 581 ntBASIC17.5■□□□□ 0.39
UBE2OQ9C0C9 CR382287.1-201ENST00000623954 586 ntBASIC17.5■□□□□ 0.39
UBE2OQ9C0C9 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
UBE2OQ9C0C9 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UBE2OQ9C0C9 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBE2OQ9C0C9 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UBE2OQ9C0C9 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
UBE2OQ9C0C9 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBE2OQ9C0C9 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBE2OQ9C0C9 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
UBE2OQ9C0C9 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UBE2OQ9C0C9 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBE2OQ9C0C9 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
UBE2OQ9C0C9 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.49■□□□□ 0.39
UBE2OQ9C0C9 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
UBE2OQ9C0C9 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBE2OQ9C0C9 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
UBE2OQ9C0C9 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
UBE2OQ9C0C9 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
UBE2OQ9C0C9 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
UBE2OQ9C0C9 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBE2OQ9C0C9 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBE2OQ9C0C9 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBE2OQ9C0C9 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC17.49■□□□□ 0.39
UBE2OQ9C0C9 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBE2OQ9C0C9 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBE2OQ9C0C9 AC104457.1-201ENST00000401024 814 ntBASIC17.49■□□□□ 0.39
UBE2OQ9C0C9 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC17.49■□□□□ 0.39
UBE2OQ9C0C9 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC17.49■□□□□ 0.39
UBE2OQ9C0C9 HIST3H2BA-201ENST00000436555 524 ntBASIC17.49■□□□□ 0.39
UBE2OQ9C0C9 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
UBE2OQ9C0C9 AC091804.1-201ENST00000486888 567 ntBASIC17.49■□□□□ 0.39
UBE2OQ9C0C9 AC106760.1-201ENST00000508690 800 ntBASIC17.49■□□□□ 0.39
UBE2OQ9C0C9 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.49■□□□□ 0.39
UBE2OQ9C0C9 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.49■□□□□ 0.39
UBE2OQ9C0C9 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
UBE2OQ9C0C9 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC17.49■□□□□ 0.39
UBE2OQ9C0C9 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC17.49■□□□□ 0.39
UBE2OQ9C0C9 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC17.49■□□□□ 0.39
UBE2OQ9C0C9 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC17.49■□□□□ 0.39
UBE2OQ9C0C9 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBE2OQ9C0C9 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
UBE2OQ9C0C9 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
UBE2OQ9C0C9 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.49■□□□□ 0.39
UBE2OQ9C0C9 KRT8P19-201ENST00000551916 1455 ntBASIC17.49■□□□□ 0.39
UBE2OQ9C0C9 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBE2OQ9C0C9 AC022211.2-201ENST00000585075 2527 ntBASIC17.49■□□□□ 0.39
UBE2OQ9C0C9 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
UBE2OQ9C0C9 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
UBE2OQ9C0C9 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
UBE2OQ9C0C9 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.49■□□□□ 0.39
UBE2OQ9C0C9 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms