Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXP3Q9BZS1 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
FOXP3Q9BZS1 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
FOXP3Q9BZS1 MIR770-201ENST00000390219 98 ntBASIC16.48■□□□□ 0.23
FOXP3Q9BZS1 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.48■□□□□ 0.23
FOXP3Q9BZS1 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.48■□□□□ 0.23
FOXP3Q9BZS1 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
FOXP3Q9BZS1 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.48■□□□□ 0.23
FOXP3Q9BZS1 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.48■□□□□ 0.23
FOXP3Q9BZS1 MIR3197-201ENST00000582241 73 ntBASIC16.48■□□□□ 0.23
FOXP3Q9BZS1 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.48■□□□□ 0.23
FOXP3Q9BZS1 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
FOXP3Q9BZS1 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXP3Q9BZS1 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXP3Q9BZS1 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
FOXP3Q9BZS1 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXP3Q9BZS1 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.48■□□□□ 0.23
FOXP3Q9BZS1 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.48■□□□□ 0.23
FOXP3Q9BZS1 AL589702.1-201ENST00000641229 1509 ntBASIC16.48■□□□□ 0.23
FOXP3Q9BZS1 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXP3Q9BZS1 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXP3Q9BZS1 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXP3Q9BZS1 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
FOXP3Q9BZS1 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.48■□□□□ 0.23
FOXP3Q9BZS1 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
FOXP3Q9BZS1 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.48■□□□□ 0.23
FOXP3Q9BZS1 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.48■□□□□ 0.23
FOXP3Q9BZS1 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.48■□□□□ 0.23
FOXP3Q9BZS1 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.48■□□□□ 0.23
FOXP3Q9BZS1 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
FOXP3Q9BZS1 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.48■□□□□ 0.23
FOXP3Q9BZS1 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
FOXP3Q9BZS1 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.47■□□□□ 0.23
FOXP3Q9BZS1 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
FOXP3Q9BZS1 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FOXP3Q9BZS1 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.47■□□□□ 0.23
FOXP3Q9BZS1 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FOXP3Q9BZS1 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FOXP3Q9BZS1 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FOXP3Q9BZS1 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.47■□□□□ 0.23
FOXP3Q9BZS1 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
FOXP3Q9BZS1 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
FOXP3Q9BZS1 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FOXP3Q9BZS1 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FOXP3Q9BZS1 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FOXP3Q9BZS1 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FOXP3Q9BZS1 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.47■□□□□ 0.23
FOXP3Q9BZS1 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FOXP3Q9BZS1 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.47■□□□□ 0.23
FOXP3Q9BZS1 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.47■□□□□ 0.23
FOXP3Q9BZS1 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.47■□□□□ 0.23
FOXP3Q9BZS1 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.47■□□□□ 0.23
FOXP3Q9BZS1 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.47■□□□□ 0.23
FOXP3Q9BZS1 AC105339.1-204ENST00000636249 355 ntBASIC16.47■□□□□ 0.23
FOXP3Q9BZS1 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
FOXP3Q9BZS1 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
FOXP3Q9BZS1 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FOXP3Q9BZS1 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.47■□□□□ 0.23
FOXP3Q9BZS1 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.47■□□□□ 0.23
FOXP3Q9BZS1 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FOXP3Q9BZS1 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
FOXP3Q9BZS1 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.47■□□□□ 0.23
FOXP3Q9BZS1 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
FOXP3Q9BZS1 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FOXP3Q9BZS1 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FOXP3Q9BZS1 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FOXP3Q9BZS1 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
FOXP3Q9BZS1 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.47■□□□□ 0.23
FOXP3Q9BZS1 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
FOXP3Q9BZS1 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
FOXP3Q9BZS1 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
FOXP3Q9BZS1 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
FOXP3Q9BZS1 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
FOXP3Q9BZS1 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FOXP3Q9BZS1 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FOXP3Q9BZS1 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
FOXP3Q9BZS1 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FOXP3Q9BZS1 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FOXP3Q9BZS1 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FOXP3Q9BZS1 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
FOXP3Q9BZS1 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
FOXP3Q9BZS1 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.46■□□□□ 0.23
FOXP3Q9BZS1 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.46■□□□□ 0.23
FOXP3Q9BZS1 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.46■□□□□ 0.23
FOXP3Q9BZS1 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.46■□□□□ 0.23
FOXP3Q9BZS1 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
FOXP3Q9BZS1 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.46■□□□□ 0.23
FOXP3Q9BZS1 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
FOXP3Q9BZS1 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FOXP3Q9BZS1 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
FOXP3Q9BZS1 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
FOXP3Q9BZS1 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.46■□□□□ 0.23
FOXP3Q9BZS1 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.46■□□□□ 0.23
FOXP3Q9BZS1 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FOXP3Q9BZS1 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.46■□□□□ 0.23
FOXP3Q9BZS1 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FOXP3Q9BZS1 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.46■□□□□ 0.23
FOXP3Q9BZS1 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.46■□□□□ 0.23
FOXP3Q9BZS1 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.46■□□□□ 0.23
FOXP3Q9BZS1 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms