Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC20.59■□□□□ 0.89
ABCA3Q99758 AC073150.1-201ENST00000450406 1084 ntBASIC20.59■□□□□ 0.89
ABCA3Q99758 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC20.59■□□□□ 0.89
ABCA3Q99758 AC009779.1-201ENST00000551138 283 ntBASIC20.59■□□□□ 0.89
ABCA3Q99758 CENPX-208ENST00000584347 799 ntTSL 2 BASIC20.59■□□□□ 0.89
ABCA3Q99758 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC20.59■□□□□ 0.89
ABCA3Q99758 AC005324.6-201ENST00000587972 613 ntBASIC20.59■□□□□ 0.89
ABCA3Q99758 COX6A1P2-201ENST00000620597 330 ntBASIC20.59■□□□□ 0.89
ABCA3Q99758 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ABCA3Q99758 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC20.59■□□□□ 0.89
ABCA3Q99758 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
ABCA3Q99758 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
ABCA3Q99758 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ABCA3Q99758 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC20.59■□□□□ 0.89
ABCA3Q99758 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC20.59■□□□□ 0.89
ABCA3Q99758 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
ABCA3Q99758 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ABCA3Q99758 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
ABCA3Q99758 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC20.59■□□□□ 0.89
ABCA3Q99758 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
ABCA3Q99758 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ABCA3Q99758 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ABCA3Q99758 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC20.59■□□□□ 0.89
ABCA3Q99758 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ABCA3Q99758 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
ABCA3Q99758 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ABCA3Q99758 HLA-K-203ENST00000430151 1046 ntBASIC20.58■□□□□ 0.89
ABCA3Q99758 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC20.58■□□□□ 0.89
ABCA3Q99758 Z97180.1-201ENST00000445173 988 ntBASIC20.58■□□□□ 0.89
ABCA3Q99758 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC20.58■□□□□ 0.89
ABCA3Q99758 AC004066.1-201ENST00000502488 802 ntBASIC20.58■□□□□ 0.89
ABCA3Q99758 IGLV3-15-201ENST00000518356 244 ntBASIC20.58■□□□□ 0.89
ABCA3Q99758 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC20.58■□□□□ 0.89
ABCA3Q99758 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC20.58■□□□□ 0.89
ABCA3Q99758 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
ABCA3Q99758 MIR3147-201ENST00000577811 66 ntBASIC20.58■□□□□ 0.89
ABCA3Q99758 MIR4683-201ENST00000579659 81 ntBASIC20.58■□□□□ 0.89
ABCA3Q99758 AC020922.3-201ENST00000595064 547 ntBASIC20.58■□□□□ 0.89
ABCA3Q99758 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC20.58■□□□□ 0.89
ABCA3Q99758 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC20.58■□□□□ 0.89
ABCA3Q99758 AL353726.2-201ENST00000623259 884 ntBASIC20.58■□□□□ 0.89
ABCA3Q99758 HLA-C-210ENST00000640219 976 ntBASIC20.58■□□□□ 0.89
ABCA3Q99758 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
ABCA3Q99758 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ABCA3Q99758 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.89
ABCA3Q99758 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ABCA3Q99758 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ABCA3Q99758 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
ABCA3Q99758 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ABCA3Q99758 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ABCA3Q99758 RN7SL8P-201ENST00000461771 266 ntBASIC20.58■□□□□ 0.88
ABCA3Q99758 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC20.58■□□□□ 0.88
ABCA3Q99758 RCC2P8-201ENST00000502779 1035 ntBASIC20.58■□□□□ 0.88
ABCA3Q99758 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC20.58■□□□□ 0.88
ABCA3Q99758 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC20.58■□□□□ 0.88
ABCA3Q99758 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC20.58■□□□□ 0.88
ABCA3Q99758 AC073352.2-201ENST00000609385 439 ntBASIC20.58■□□□□ 0.88
ABCA3Q99758 AL353770.1-201ENST00000614915 403 ntBASIC20.58■□□□□ 0.88
ABCA3Q99758 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.88
ABCA3Q99758 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ABCA3Q99758 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ABCA3Q99758 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ABCA3Q99758 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC20.57■□□□□ 0.88
ABCA3Q99758 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
ABCA3Q99758 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ABCA3Q99758 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ABCA3Q99758 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ABCA3Q99758 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ABCA3Q99758 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ABCA3Q99758 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ABCA3Q99758 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC20.57■□□□□ 0.88
ABCA3Q99758 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC20.57■□□□□ 0.88
ABCA3Q99758 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC20.57■□□□□ 0.88
ABCA3Q99758 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC20.57■□□□□ 0.88
ABCA3Q99758 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC20.57■□□□□ 0.88
ABCA3Q99758 WT1-AS_6.1-201ENST00000614919 121 ntBASIC20.57■□□□□ 0.88
ABCA3Q99758 AL603764.1-201ENST00000636452 321 ntBASIC20.57■□□□□ 0.88
ABCA3Q99758 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ABCA3Q99758 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ABCA3Q99758 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ABCA3Q99758 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC20.57■□□□□ 0.88
ABCA3Q99758 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
ABCA3Q99758 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC20.57■□□□□ 0.88
ABCA3Q99758 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC20.57■□□□□ 0.88
ABCA3Q99758 AC011477.6-201ENST00000604980 1927 ntBASIC20.57■□□□□ 0.88
ABCA3Q99758 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
ABCA3Q99758 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ABCA3Q99758 AC007787.1-201ENST00000588095 1583 ntBASIC20.57■□□□□ 0.88
ABCA3Q99758 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC20.56■□□□□ 0.88
ABCA3Q99758 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ABCA3Q99758 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ABCA3Q99758 AC055811.4-201ENST00000624039 1754 ntBASIC20.56■□□□□ 0.88
ABCA3Q99758 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ABCA3Q99758 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC20.56■□□□□ 0.88
ABCA3Q99758 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC20.56■□□□□ 0.88
ABCA3Q99758 AC242376.1-201ENST00000559033 726 ntBASIC20.56■□□□□ 0.88
ABCA3Q99758 SAMD11P1-201ENST00000571429 661 ntBASIC20.56■□□□□ 0.88
ABCA3Q99758 WDR7-208ENST00000589935 544 ntTSL 4 BASIC20.56■□□□□ 0.88
ABCA3Q99758 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC20.56■□□□□ 0.88
ABCA3Q99758 MEG3_2.1-201ENST00000611456 105 ntBASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms