Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC13.2□□□□□ -0.3
S1PR3Q99500 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
S1PR3Q99500 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
S1PR3Q99500 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC13.2□□□□□ -0.3
S1PR3Q99500 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
S1PR3Q99500 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC13.2□□□□□ -0.3
S1PR3Q99500 AL135744.1-201ENST00000565098 629 ntBASIC13.2□□□□□ -0.3
S1PR3Q99500 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
S1PR3Q99500 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13.2□□□□□ -0.3
S1PR3Q99500 AC010327.4-202ENST00000591484 748 ntBASIC13.2□□□□□ -0.3
S1PR3Q99500 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
S1PR3Q99500 CITED2-204ENST00000618718 901 ntTSL 2 BASIC13.2□□□□□ -0.3
S1PR3Q99500 AC008267.7-201ENST00000624570 1194 ntBASIC13.2□□□□□ -0.3
S1PR3Q99500 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
S1PR3Q99500 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
S1PR3Q99500 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
S1PR3Q99500 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.2□□□□□ -0.3
S1PR3Q99500 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
S1PR3Q99500 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.2□□□□□ -0.3
S1PR3Q99500 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
S1PR3Q99500 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.2□□□□□ -0.3
S1PR3Q99500 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
S1PR3Q99500 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
S1PR3Q99500 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
S1PR3Q99500 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
S1PR3Q99500 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
S1PR3Q99500 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC13.2□□□□□ -0.3
S1PR3Q99500 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
S1PR3Q99500 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
S1PR3Q99500 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
S1PR3Q99500 AC011477.6-201ENST00000604980 1927 ntBASIC13.19□□□□□ -0.3
S1PR3Q99500 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
S1PR3Q99500 AC092384.3-202ENST00000564646 2873 ntBASIC13.19□□□□□ -0.3
S1PR3Q99500 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
S1PR3Q99500 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
S1PR3Q99500 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.19□□□□□ -0.3
S1PR3Q99500 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.19□□□□□ -0.3
S1PR3Q99500 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
S1PR3Q99500 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
S1PR3Q99500 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
S1PR3Q99500 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
S1PR3Q99500 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
S1PR3Q99500 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
S1PR3Q99500 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
S1PR3Q99500 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
S1PR3Q99500 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
S1PR3Q99500 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC13.19□□□□□ -0.3
S1PR3Q99500 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
S1PR3Q99500 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
S1PR3Q99500 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
S1PR3Q99500 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
S1PR3Q99500 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
S1PR3Q99500 CD82-202ENST00000342935 967 ntTSL 5 BASIC13.19□□□□□ -0.3
S1PR3Q99500 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
S1PR3Q99500 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
S1PR3Q99500 AL355306.1-201ENST00000415580 579 ntBASIC13.19□□□□□ -0.3
S1PR3Q99500 UPF3AP3-201ENST00000420996 769 ntBASIC13.19□□□□□ -0.3
S1PR3Q99500 GPX1P2-201ENST00000429271 606 ntBASIC13.19□□□□□ -0.3
S1PR3Q99500 SPDYE11-202ENST00000450699 704 ntBASIC13.19□□□□□ -0.3
S1PR3Q99500 ALG1L5P-201ENST00000482043 771 ntBASIC13.19□□□□□ -0.3
S1PR3Q99500 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC13.19□□□□□ -0.3
S1PR3Q99500 IGHV3-62-201ENST00000520057 340 ntBASIC13.19□□□□□ -0.3
S1PR3Q99500 IGHV3OR16-6-201ENST00000568775 360 ntBASIC13.19□□□□□ -0.3
S1PR3Q99500 SPDYE9P-201ENST00000570642 692 ntBASIC13.19□□□□□ -0.3
S1PR3Q99500 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC13.19□□□□□ -0.3
S1PR3Q99500 AC027307.2-201ENST00000591252 911 ntBASIC13.19□□□□□ -0.3
S1PR3Q99500 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC13.19□□□□□ -0.3
S1PR3Q99500 SPDYE10P-202ENST00000612005 668 ntBASIC13.19□□□□□ -0.3
S1PR3Q99500 SPDYE8P-202ENST00000612377 668 ntBASIC13.19□□□□□ -0.3
S1PR3Q99500 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
S1PR3Q99500 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
S1PR3Q99500 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
S1PR3Q99500 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
S1PR3Q99500 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
S1PR3Q99500 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC13.19□□□□□ -0.3
S1PR3Q99500 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.19□□□□□ -0.3
S1PR3Q99500 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
S1PR3Q99500 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.19□□□□□ -0.3
S1PR3Q99500 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.19□□□□□ -0.3
S1PR3Q99500 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
S1PR3Q99500 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
S1PR3Q99500 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.19□□□□□ -0.3
S1PR3Q99500 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
S1PR3Q99500 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
S1PR3Q99500 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
S1PR3Q99500 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
S1PR3Q99500 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
S1PR3Q99500 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
S1PR3Q99500 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
S1PR3Q99500 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC13.19□□□□□ -0.3
S1PR3Q99500 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
S1PR3Q99500 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
S1PR3Q99500 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC13.18□□□□□ -0.3
S1PR3Q99500 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
S1PR3Q99500 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
S1PR3Q99500 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.18□□□□□ -0.3
S1PR3Q99500 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
S1PR3Q99500 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.18□□□□□ -0.3
S1PR3Q99500 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
S1PR3Q99500 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms