Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC46A1Q96NT5 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
SLC46A1Q96NT5 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC46A1Q96NT5 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC46A1Q96NT5 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC46A1Q96NT5 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC46A1Q96NT5 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.17■□□□□ 0.02
SLC46A1Q96NT5 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC46A1Q96NT5 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC46A1Q96NT5 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC46A1Q96NT5 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SLC46A1Q96NT5 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC46A1Q96NT5 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC46A1Q96NT5 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC46A1Q96NT5 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC46A1Q96NT5 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC46A1Q96NT5 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.17■□□□□ 0.02
SLC46A1Q96NT5 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC46A1Q96NT5 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC46A1Q96NT5 MTHFR-217ENST00000641820 1569 ntBASIC15.17■□□□□ 0.02
SLC46A1Q96NT5 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC46A1Q96NT5 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC46A1Q96NT5 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SLC46A1Q96NT5 APOC3-202ENST00000375345 604 ntTSL 5 BASIC15.17■□□□□ 0.02
SLC46A1Q96NT5 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC46A1Q96NT5 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.17■□□□□ 0.02
SLC46A1Q96NT5 CSF2RBP1-201ENST00000447905 391 ntBASIC15.17■□□□□ 0.02
SLC46A1Q96NT5 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.17■□□□□ 0.02
SLC46A1Q96NT5 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.17■□□□□ 0.02
SLC46A1Q96NT5 TDH-203ENST00000531764 1110 ntBASIC15.17■□□□□ 0.02
SLC46A1Q96NT5 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.17■□□□□ 0.02
SLC46A1Q96NT5 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.17■□□□□ 0.02
SLC46A1Q96NT5 MIR5189-201ENST00000577370 114 ntBASIC15.17■□□□□ 0.02
SLC46A1Q96NT5 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC46A1Q96NT5 LINC01115-203ENST00000606068 577 ntBASIC15.17■□□□□ 0.02
SLC46A1Q96NT5 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.17■□□□□ 0.02
SLC46A1Q96NT5 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
SLC46A1Q96NT5 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
SLC46A1Q96NT5 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC46A1Q96NT5 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.17■□□□□ 0.02
SLC46A1Q96NT5 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SLC46A1Q96NT5 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SLC46A1Q96NT5 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC46A1Q96NT5 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC46A1Q96NT5 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
SLC46A1Q96NT5 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC46A1Q96NT5 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC46A1Q96NT5 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC46A1Q96NT5 AC006449.6-201ENST00000612330 2296 ntBASIC15.17■□□□□ 0.02
SLC46A1Q96NT5 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC46A1Q96NT5 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.16■□□□□ 0.02
SLC46A1Q96NT5 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC46A1Q96NT5 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
SLC46A1Q96NT5 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC46A1Q96NT5 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SLC46A1Q96NT5 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.16■□□□□ 0.02
SLC46A1Q96NT5 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC46A1Q96NT5 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC46A1Q96NT5 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC46A1Q96NT5 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC46A1Q96NT5 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC46A1Q96NT5 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC46A1Q96NT5 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SLC46A1Q96NT5 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
SLC46A1Q96NT5 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
SLC46A1Q96NT5 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.16■□□□□ 0.02
SLC46A1Q96NT5 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
SLC46A1Q96NT5 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC46A1Q96NT5 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
SLC46A1Q96NT5 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.16■□□□□ 0.02
SLC46A1Q96NT5 BRWD1P1-201ENST00000401091 371 ntBASIC15.16■□□□□ 0.02
SLC46A1Q96NT5 AC099336.1-201ENST00000417053 1171 ntBASIC15.16■□□□□ 0.02
SLC46A1Q96NT5 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.16■□□□□ 0.02
SLC46A1Q96NT5 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
SLC46A1Q96NT5 AL355994.2-201ENST00000447882 704 ntBASIC15.16■□□□□ 0.02
SLC46A1Q96NT5 FO681548.1-201ENST00000455617 1132 ntBASIC15.16■□□□□ 0.02
SLC46A1Q96NT5 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.16■□□□□ 0.02
SLC46A1Q96NT5 CD74-212ENST00000524315 584 ntTSL 5 BASIC15.16■□□□□ 0.02
SLC46A1Q96NT5 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC46A1Q96NT5 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.16■□□□□ 0.02
SLC46A1Q96NT5 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC46A1Q96NT5 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.16■□□□□ 0.02
SLC46A1Q96NT5 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.16■□□□□ 0.02
SLC46A1Q96NT5 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC46A1Q96NT5 AC006449.5-201ENST00000610658 2098 ntBASIC15.16■□□□□ 0.02
SLC46A1Q96NT5 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC46A1Q96NT5 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC46A1Q96NT5 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.16■□□□□ 0.02
SLC46A1Q96NT5 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC46A1Q96NT5 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC46A1Q96NT5 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC46A1Q96NT5 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC46A1Q96NT5 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
SLC46A1Q96NT5 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC46A1Q96NT5 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
SLC46A1Q96NT5 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.15■□□□□ 0.02
SLC46A1Q96NT5 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC46A1Q96NT5 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC46A1Q96NT5 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.15■□□□□ 0.02
SLC46A1Q96NT5 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms