Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.23■□□□□ 0.03
ITCHQ96J02 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ITCHQ96J02 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ITCHQ96J02 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.23■□□□□ 0.03
ITCHQ96J02 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ITCHQ96J02 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.23■□□□□ 0.03
ITCHQ96J02 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ITCHQ96J02 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.23■□□□□ 0.03
ITCHQ96J02 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
ITCHQ96J02 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
ITCHQ96J02 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ITCHQ96J02 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.23■□□□□ 0.03
ITCHQ96J02 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
ITCHQ96J02 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ITCHQ96J02 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
ITCHQ96J02 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
ITCHQ96J02 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
ITCHQ96J02 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ITCHQ96J02 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ITCHQ96J02 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.23■□□□□ 0.03
ITCHQ96J02 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.23■□□□□ 0.03
ITCHQ96J02 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ITCHQ96J02 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ITCHQ96J02 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.22■□□□□ 0.03
ITCHQ96J02 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ITCHQ96J02 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.22■□□□□ 0.03
ITCHQ96J02 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ITCHQ96J02 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.22■□□□□ 0.03
ITCHQ96J02 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ITCHQ96J02 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ITCHQ96J02 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ITCHQ96J02 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ITCHQ96J02 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
ITCHQ96J02 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.22■□□□□ 0.03
ITCHQ96J02 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ITCHQ96J02 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ITCHQ96J02 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.22■□□□□ 0.03
ITCHQ96J02 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ITCHQ96J02 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.22■□□□□ 0.03
ITCHQ96J02 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ITCHQ96J02 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
ITCHQ96J02 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.22■□□□□ 0.03
ITCHQ96J02 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ITCHQ96J02 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ITCHQ96J02 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ITCHQ96J02 AC243562.2-201ENST00000561247 970 ntBASIC15.22■□□□□ 0.03
ITCHQ96J02 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ITCHQ96J02 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.22■□□□□ 0.03
ITCHQ96J02 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
ITCHQ96J02 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ITCHQ96J02 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.22■□□□□ 0.03
ITCHQ96J02 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ITCHQ96J02 SNX18-202ENST00000343017 3140 ntBASIC15.22■□□□□ 0.03
ITCHQ96J02 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ITCHQ96J02 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.22■□□□□ 0.03
ITCHQ96J02 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
ITCHQ96J02 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ITCHQ96J02 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ITCHQ96J02 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ITCHQ96J02 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
ITCHQ96J02 AC092127.1-201ENST00000567093 3455 ntBASIC15.22■□□□□ 0.03
ITCHQ96J02 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.21■□□□□ 0.03
ITCHQ96J02 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ITCHQ96J02 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
ITCHQ96J02 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ITCHQ96J02 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
ITCHQ96J02 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ITCHQ96J02 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ITCHQ96J02 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ITCHQ96J02 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ITCHQ96J02 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
ITCHQ96J02 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
ITCHQ96J02 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ITCHQ96J02 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.21■□□□□ 0.03
ITCHQ96J02 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ITCHQ96J02 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ITCHQ96J02 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ITCHQ96J02 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.21■□□□□ 0.03
ITCHQ96J02 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
ITCHQ96J02 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.21■□□□□ 0.03
ITCHQ96J02 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.21■□□□□ 0.03
ITCHQ96J02 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.21■□□□□ 0.03
ITCHQ96J02 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
ITCHQ96J02 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.21■□□□□ 0.03
ITCHQ96J02 KRT19P2-202ENST00000557173 1012 ntBASIC15.21■□□□□ 0.03
ITCHQ96J02 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.21■□□□□ 0.03
ITCHQ96J02 AC024267.1-201ENST00000582320 895 ntBASIC15.21■□□□□ 0.03
ITCHQ96J02 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.21■□□□□ 0.03
ITCHQ96J02 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ITCHQ96J02 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.21■□□□□ 0.03
ITCHQ96J02 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.21■□□□□ 0.03
ITCHQ96J02 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
ITCHQ96J02 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.21■□□□□ 0.03
ITCHQ96J02 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
ITCHQ96J02 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.21■□□□□ 0.03
ITCHQ96J02 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.21■□□□□ 0.03
ITCHQ96J02 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.21■□□□□ 0.03
ITCHQ96J02 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.21■□□□□ 0.03
ITCHQ96J02 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ITCHQ96J02 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.21■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms