Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PGBD4Q96DM1 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PGBD4Q96DM1 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
PGBD4Q96DM1 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PGBD4Q96DM1 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
PGBD4Q96DM1 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC17.21■□□□□ 0.35
PGBD4Q96DM1 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.21■□□□□ 0.35
PGBD4Q96DM1 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC17.21■□□□□ 0.35
PGBD4Q96DM1 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC17.21■□□□□ 0.35
PGBD4Q96DM1 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC17.21■□□□□ 0.35
PGBD4Q96DM1 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC17.21■□□□□ 0.35
PGBD4Q96DM1 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
PGBD4Q96DM1 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PGBD4Q96DM1 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
PGBD4Q96DM1 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PGBD4Q96DM1 AL391069.4-201ENST00000609583 481 ntBASIC17.21■□□□□ 0.35
PGBD4Q96DM1 MIR6752-201ENST00000618442 71 ntBASIC17.21■□□□□ 0.35
PGBD4Q96DM1 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.21■□□□□ 0.35
PGBD4Q96DM1 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.21■□□□□ 0.35
PGBD4Q96DM1 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.21■□□□□ 0.35
PGBD4Q96DM1 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PGBD4Q96DM1 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
PGBD4Q96DM1 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.21■□□□□ 0.35
PGBD4Q96DM1 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.21■□□□□ 0.35
PGBD4Q96DM1 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.21■□□□□ 0.35
PGBD4Q96DM1 CDC14C-201ENST00000428251 1719 ntBASIC17.21■□□□□ 0.35
PGBD4Q96DM1 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.21■□□□□ 0.35
PGBD4Q96DM1 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
PGBD4Q96DM1 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PGBD4Q96DM1 AL139384.1-201ENST00000612143 3047 ntBASIC17.21■□□□□ 0.34
PGBD4Q96DM1 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
PGBD4Q96DM1 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
PGBD4Q96DM1 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PGBD4Q96DM1 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
PGBD4Q96DM1 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.2■□□□□ 0.34
PGBD4Q96DM1 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.2■□□□□ 0.34
PGBD4Q96DM1 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PGBD4Q96DM1 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PGBD4Q96DM1 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PGBD4Q96DM1 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PGBD4Q96DM1 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PGBD4Q96DM1 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.2■□□□□ 0.34
PGBD4Q96DM1 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PGBD4Q96DM1 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
PGBD4Q96DM1 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PGBD4Q96DM1 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.2■□□□□ 0.34
PGBD4Q96DM1 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
PGBD4Q96DM1 MXI1-205ENST00000393134 889 ntTSL 2 BASIC17.2■□□□□ 0.34
PGBD4Q96DM1 TOMM22P5-201ENST00000416399 439 ntBASIC17.2■□□□□ 0.34
PGBD4Q96DM1 AC074338.1-201ENST00000416825 156 ntBASIC17.2■□□□□ 0.34
PGBD4Q96DM1 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.2■□□□□ 0.34
PGBD4Q96DM1 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.2■□□□□ 0.34
PGBD4Q96DM1 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC17.2■□□□□ 0.34
PGBD4Q96DM1 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.2■□□□□ 0.34
PGBD4Q96DM1 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PGBD4Q96DM1 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC17.2■□□□□ 0.34
PGBD4Q96DM1 AC017083.2-201ENST00000608069 979 ntBASIC17.2■□□□□ 0.34
PGBD4Q96DM1 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PGBD4Q96DM1 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PGBD4Q96DM1 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
PGBD4Q96DM1 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.2■□□□□ 0.34
PGBD4Q96DM1 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PGBD4Q96DM1 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.2■□□□□ 0.34
PGBD4Q96DM1 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PGBD4Q96DM1 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.2■□□□□ 0.34
PGBD4Q96DM1 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
PGBD4Q96DM1 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PGBD4Q96DM1 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PGBD4Q96DM1 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PGBD4Q96DM1 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PGBD4Q96DM1 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
PGBD4Q96DM1 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PGBD4Q96DM1 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PGBD4Q96DM1 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
PGBD4Q96DM1 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
PGBD4Q96DM1 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PGBD4Q96DM1 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.19■□□□□ 0.34
PGBD4Q96DM1 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
PGBD4Q96DM1 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PGBD4Q96DM1 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.19■□□□□ 0.34
PGBD4Q96DM1 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
PGBD4Q96DM1 MIR648-201ENST00000385046 94 ntBASIC17.19■□□□□ 0.34
PGBD4Q96DM1 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
PGBD4Q96DM1 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
PGBD4Q96DM1 AL442647.2-201ENST00000429864 857 ntBASIC17.19■□□□□ 0.34
PGBD4Q96DM1 GALT-202ENST00000450095 1280 ntTSL 2 BASIC17.19■□□□□ 0.34
PGBD4Q96DM1 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC17.19■□□□□ 0.34
PGBD4Q96DM1 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.19■□□□□ 0.34
PGBD4Q96DM1 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.19■□□□□ 0.34
PGBD4Q96DM1 SLED1-202ENST00000512051 380 ntBASIC17.19■□□□□ 0.34
PGBD4Q96DM1 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
PGBD4Q96DM1 FUZ-207ENST00000526575 482 ntTSL 4 BASIC17.19■□□□□ 0.34
PGBD4Q96DM1 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC17.19■□□□□ 0.34
PGBD4Q96DM1 KRT17P8-201ENST00000540749 863 ntBASIC17.19■□□□□ 0.34
PGBD4Q96DM1 HILS1-202ENST00000545329 423 ntBASIC17.19■□□□□ 0.34
PGBD4Q96DM1 RAB43P1-201ENST00000561790 589 ntBASIC17.19■□□□□ 0.34
PGBD4Q96DM1 PIGL-212ENST00000581006 554 ntTSL 4 BASIC17.19■□□□□ 0.34
PGBD4Q96DM1 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.19■□□□□ 0.34
PGBD4Q96DM1 IFT20-216ENST00000588477 774 ntTSL 5 BASIC17.19■□□□□ 0.34
PGBD4Q96DM1 APOC4-201ENST00000591600 348 ntTSL 3 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms