Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC17.08■□□□□ 0.32
SEMA4DQ92854 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.08■□□□□ 0.32
SEMA4DQ92854 CENPM-206ENST00000407253 818 ntTSL 2 BASIC17.08■□□□□ 0.32
SEMA4DQ92854 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.08■□□□□ 0.32
SEMA4DQ92854 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.08■□□□□ 0.32
SEMA4DQ92854 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SEMA4DQ92854 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
SEMA4DQ92854 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.08■□□□□ 0.32
SEMA4DQ92854 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SEMA4DQ92854 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC17.08■□□□□ 0.32
SEMA4DQ92854 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.08■□□□□ 0.32
SEMA4DQ92854 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.08■□□□□ 0.32
SEMA4DQ92854 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.08■□□□□ 0.32
SEMA4DQ92854 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SEMA4DQ92854 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.08■□□□□ 0.32
SEMA4DQ92854 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.08■□□□□ 0.32
SEMA4DQ92854 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.08■□□□□ 0.32
SEMA4DQ92854 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.08■□□□□ 0.32
SEMA4DQ92854 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SEMA4DQ92854 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.08■□□□□ 0.32
SEMA4DQ92854 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.08■□□□□ 0.32
SEMA4DQ92854 AL158211.3-201ENST00000607385 239 ntBASIC17.08■□□□□ 0.32
SEMA4DQ92854 AL844908.2-201ENST00000609461 460 ntBASIC17.08■□□□□ 0.32
SEMA4DQ92854 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
SEMA4DQ92854 AL590560.3-201ENST00000623350 461 ntBASIC17.08■□□□□ 0.32
SEMA4DQ92854 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SEMA4DQ92854 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SEMA4DQ92854 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC17.08■□□□□ 0.32
SEMA4DQ92854 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SEMA4DQ92854 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SEMA4DQ92854 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.08■□□□□ 0.32
SEMA4DQ92854 PPT1-215ENST00000641471 2368 ntBASIC17.08■□□□□ 0.32
SEMA4DQ92854 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC17.08■□□□□ 0.32
SEMA4DQ92854 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SEMA4DQ92854 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SEMA4DQ92854 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SEMA4DQ92854 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SEMA4DQ92854 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SEMA4DQ92854 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SEMA4DQ92854 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SEMA4DQ92854 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SEMA4DQ92854 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SEMA4DQ92854 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SEMA4DQ92854 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SEMA4DQ92854 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SEMA4DQ92854 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.07■□□□□ 0.32
SEMA4DQ92854 AC073347.1-201ENST00000421633 2643 ntBASIC17.07■□□□□ 0.32
SEMA4DQ92854 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.07■□□□□ 0.32
SEMA4DQ92854 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SEMA4DQ92854 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SEMA4DQ92854 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.07■□□□□ 0.32
SEMA4DQ92854 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.07■□□□□ 0.32
SEMA4DQ92854 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SEMA4DQ92854 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SEMA4DQ92854 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SEMA4DQ92854 AC013268.4-201ENST00000637413 2228 ntBASIC17.07■□□□□ 0.32
SEMA4DQ92854 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SEMA4DQ92854 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SEMA4DQ92854 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SEMA4DQ92854 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.07■□□□□ 0.32
SEMA4DQ92854 TSSK5P-201ENST00000423978 907 ntBASIC17.07■□□□□ 0.32
SEMA4DQ92854 PMS2P2-201ENST00000425039 1128 ntBASIC17.07■□□□□ 0.32
SEMA4DQ92854 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.07■□□□□ 0.32
SEMA4DQ92854 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SEMA4DQ92854 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.07■□□□□ 0.32
SEMA4DQ92854 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.07■□□□□ 0.32
SEMA4DQ92854 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.07■□□□□ 0.32
SEMA4DQ92854 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.07■□□□□ 0.32
SEMA4DQ92854 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.07■□□□□ 0.32
SEMA4DQ92854 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SEMA4DQ92854 AC025048.3-201ENST00000590609 569 ntBASIC17.07■□□□□ 0.32
SEMA4DQ92854 AC005702.4-201ENST00000618393 416 ntBASIC17.07■□□□□ 0.32
SEMA4DQ92854 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SEMA4DQ92854 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.07■□□□□ 0.32
SEMA4DQ92854 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC17.07■□□□□ 0.32
SEMA4DQ92854 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SEMA4DQ92854 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SEMA4DQ92854 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.07■□□□□ 0.32
SEMA4DQ92854 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SEMA4DQ92854 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SEMA4DQ92854 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SEMA4DQ92854 AC127383.1-201ENST00000444697 1800 ntBASIC17.07■□□□□ 0.32
SEMA4DQ92854 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SEMA4DQ92854 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SEMA4DQ92854 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.07■□□□□ 0.32
SEMA4DQ92854 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.07■□□□□ 0.32
SEMA4DQ92854 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.07■□□□□ 0.32
SEMA4DQ92854 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SEMA4DQ92854 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SEMA4DQ92854 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SEMA4DQ92854 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.06■□□□□ 0.32
SEMA4DQ92854 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SEMA4DQ92854 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.06■□□□□ 0.32
SEMA4DQ92854 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SEMA4DQ92854 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SEMA4DQ92854 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.06■□□□□ 0.32
SEMA4DQ92854 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SEMA4DQ92854 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SEMA4DQ92854 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SEMA4DQ92854 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms