Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NKX2-3Q8TAU0 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC18.72■□□□□ 0.59
NKX2-3Q8TAU0 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC18.72■□□□□ 0.59
NKX2-3Q8TAU0 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
NKX2-3Q8TAU0 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
NKX2-3Q8TAU0 BOLA2P3-201ENST00000404566 256 ntBASIC18.72■□□□□ 0.59
NKX2-3Q8TAU0 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC18.72■□□□□ 0.59
NKX2-3Q8TAU0 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
NKX2-3Q8TAU0 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC18.72■□□□□ 0.59
NKX2-3Q8TAU0 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NKX2-3Q8TAU0 FUZ-207ENST00000526575 482 ntTSL 4 BASIC18.72■□□□□ 0.59
NKX2-3Q8TAU0 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NKX2-3Q8TAU0 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC18.72■□□□□ 0.59
NKX2-3Q8TAU0 MIR6787-201ENST00000616675 61 ntBASIC18.72■□□□□ 0.59
NKX2-3Q8TAU0 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NKX2-3Q8TAU0 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NKX2-3Q8TAU0 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
NKX2-3Q8TAU0 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC18.72■□□□□ 0.59
NKX2-3Q8TAU0 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NKX2-3Q8TAU0 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NKX2-3Q8TAU0 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
NKX2-3Q8TAU0 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.72■□□□□ 0.59
NKX2-3Q8TAU0 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NKX2-3Q8TAU0 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC18.72■□□□□ 0.59
NKX2-3Q8TAU0 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC18.72■□□□□ 0.59
NKX2-3Q8TAU0 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
NKX2-3Q8TAU0 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
NKX2-3Q8TAU0 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NKX2-3Q8TAU0 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NKX2-3Q8TAU0 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
NKX2-3Q8TAU0 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.71■□□□□ 0.59
NKX2-3Q8TAU0 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC18.71■□□□□ 0.59
NKX2-3Q8TAU0 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NKX2-3Q8TAU0 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC18.71■□□□□ 0.59
NKX2-3Q8TAU0 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NKX2-3Q8TAU0 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC18.71■□□□□ 0.59
NKX2-3Q8TAU0 AC004945.1-201ENST00000416738 983 ntBASIC18.71■□□□□ 0.59
NKX2-3Q8TAU0 MEP1AP4-201ENST00000423244 1087 ntBASIC18.71■□□□□ 0.59
NKX2-3Q8TAU0 HLA-DPB2-205ENST00000435074 1188 ntBASIC18.71■□□□□ 0.59
NKX2-3Q8TAU0 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.71■□□□□ 0.59
NKX2-3Q8TAU0 AC055876.2-201ENST00000531834 546 ntBASIC18.71■□□□□ 0.59
NKX2-3Q8TAU0 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC18.71■□□□□ 0.59
NKX2-3Q8TAU0 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC18.71■□□□□ 0.59
NKX2-3Q8TAU0 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC18.71■□□□□ 0.59
NKX2-3Q8TAU0 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.71■□□□□ 0.59
NKX2-3Q8TAU0 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC18.71■□□□□ 0.59
NKX2-3Q8TAU0 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NKX2-3Q8TAU0 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NKX2-3Q8TAU0 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
NKX2-3Q8TAU0 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
NKX2-3Q8TAU0 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NKX2-3Q8TAU0 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NKX2-3Q8TAU0 BCL2-203ENST00000589955 5011 ntBASIC18.71■□□□□ 0.58
NKX2-3Q8TAU0 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NKX2-3Q8TAU0 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC18.7■□□□□ 0.58
NKX2-3Q8TAU0 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
NKX2-3Q8TAU0 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC18.7■□□□□ 0.58
NKX2-3Q8TAU0 SLC7A15P-201ENST00000424028 1363 ntBASIC18.7■□□□□ 0.58
NKX2-3Q8TAU0 KRT8P44-201ENST00000441609 1350 ntBASIC18.7■□□□□ 0.58
NKX2-3Q8TAU0 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC18.7■□□□□ 0.58
NKX2-3Q8TAU0 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
NKX2-3Q8TAU0 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
NKX2-3Q8TAU0 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NKX2-3Q8TAU0 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
NKX2-3Q8TAU0 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
NKX2-3Q8TAU0 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NKX2-3Q8TAU0 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NKX2-3Q8TAU0 BCYRN1-201ENST00000418539 200 ntBASIC18.7■□□□□ 0.58
NKX2-3Q8TAU0 HIST1H2BPS3-201ENST00000419683 341 ntBASIC18.7■□□□□ 0.58
NKX2-3Q8TAU0 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
NKX2-3Q8TAU0 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC18.7■□□□□ 0.58
NKX2-3Q8TAU0 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
NKX2-3Q8TAU0 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
NKX2-3Q8TAU0 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NKX2-3Q8TAU0 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NKX2-3Q8TAU0 AC119751.2-201ENST00000504529 210 ntBASIC18.7■□□□□ 0.58
NKX2-3Q8TAU0 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC18.7■□□□□ 0.58
NKX2-3Q8TAU0 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC18.7■□□□□ 0.58
NKX2-3Q8TAU0 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC18.7■□□□□ 0.58
NKX2-3Q8TAU0 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC18.7■□□□□ 0.58
NKX2-3Q8TAU0 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC18.7■□□□□ 0.58
NKX2-3Q8TAU0 AL391069.4-201ENST00000609583 481 ntBASIC18.7■□□□□ 0.58
NKX2-3Q8TAU0 MIR6069-201ENST00000620069 79 ntBASIC18.7■□□□□ 0.58
NKX2-3Q8TAU0 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC18.7■□□□□ 0.58
NKX2-3Q8TAU0 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NKX2-3Q8TAU0 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NKX2-3Q8TAU0 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
NKX2-3Q8TAU0 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC18.7■□□□□ 0.58
NKX2-3Q8TAU0 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
NKX2-3Q8TAU0 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC18.7■□□□□ 0.58
NKX2-3Q8TAU0 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NKX2-3Q8TAU0 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
NKX2-3Q8TAU0 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NKX2-3Q8TAU0 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NKX2-3Q8TAU0 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NKX2-3Q8TAU0 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
NKX2-3Q8TAU0 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NKX2-3Q8TAU0 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC18.69■□□□□ 0.58
NKX2-3Q8TAU0 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NKX2-3Q8TAU0 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms