Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LMO3Q8TAP4 RPL13P2-201ENST00000440687 659 ntBASIC16.98■□□□□ 0.31
LMO3Q8TAP4 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.98■□□□□ 0.31
LMO3Q8TAP4 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.98■□□□□ 0.31
LMO3Q8TAP4 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.98■□□□□ 0.31
LMO3Q8TAP4 AC069120.2-201ENST00000524091 540 ntBASIC16.98■□□□□ 0.31
LMO3Q8TAP4 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.98■□□□□ 0.31
LMO3Q8TAP4 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.98■□□□□ 0.31
LMO3Q8TAP4 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.98■□□□□ 0.31
LMO3Q8TAP4 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.98■□□□□ 0.31
LMO3Q8TAP4 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LMO3Q8TAP4 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LMO3Q8TAP4 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.98■□□□□ 0.31
LMO3Q8TAP4 KRT8P44-201ENST00000441609 1350 ntBASIC16.98■□□□□ 0.31
LMO3Q8TAP4 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.98■□□□□ 0.31
LMO3Q8TAP4 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
LMO3Q8TAP4 AC023157.3-201ENST00000619086 2088 ntBASIC16.98■□□□□ 0.31
LMO3Q8TAP4 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LMO3Q8TAP4 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
LMO3Q8TAP4 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LMO3Q8TAP4 OR6D1P-203ENST00000641209 4860 ntBASIC16.97■□□□□ 0.31
LMO3Q8TAP4 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
LMO3Q8TAP4 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LMO3Q8TAP4 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LMO3Q8TAP4 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.97■□□□□ 0.31
LMO3Q8TAP4 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.97■□□□□ 0.31
LMO3Q8TAP4 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LMO3Q8TAP4 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
LMO3Q8TAP4 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LMO3Q8TAP4 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.97■□□□□ 0.31
LMO3Q8TAP4 TSSK5P-201ENST00000423978 907 ntBASIC16.97■□□□□ 0.31
LMO3Q8TAP4 METTL21AP1-201ENST00000438852 635 ntBASIC16.97■□□□□ 0.31
LMO3Q8TAP4 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.97■□□□□ 0.31
LMO3Q8TAP4 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
LMO3Q8TAP4 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.97■□□□□ 0.31
LMO3Q8TAP4 SERBP1P3-201ENST00000459980 809 ntBASIC16.97■□□□□ 0.31
LMO3Q8TAP4 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.97■□□□□ 0.31
LMO3Q8TAP4 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.97■□□□□ 0.31
LMO3Q8TAP4 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.97■□□□□ 0.31
LMO3Q8TAP4 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.97■□□□□ 0.31
LMO3Q8TAP4 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.97■□□□□ 0.31
LMO3Q8TAP4 AL158211.3-201ENST00000607385 239 ntBASIC16.97■□□□□ 0.31
LMO3Q8TAP4 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.97■□□□□ 0.31
LMO3Q8TAP4 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
LMO3Q8TAP4 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LMO3Q8TAP4 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LMO3Q8TAP4 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LMO3Q8TAP4 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LMO3Q8TAP4 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.97■□□□□ 0.31
LMO3Q8TAP4 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LMO3Q8TAP4 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.97■□□□□ 0.31
LMO3Q8TAP4 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.97■□□□□ 0.31
LMO3Q8TAP4 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.97■□□□□ 0.31
LMO3Q8TAP4 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
LMO3Q8TAP4 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LMO3Q8TAP4 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LMO3Q8TAP4 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.96■□□□□ 0.31
LMO3Q8TAP4 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LMO3Q8TAP4 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LMO3Q8TAP4 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.96■□□□□ 0.31
LMO3Q8TAP4 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LMO3Q8TAP4 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
LMO3Q8TAP4 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.96■□□□□ 0.31
LMO3Q8TAP4 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LMO3Q8TAP4 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LMO3Q8TAP4 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LMO3Q8TAP4 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LMO3Q8TAP4 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
LMO3Q8TAP4 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
LMO3Q8TAP4 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LMO3Q8TAP4 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LMO3Q8TAP4 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.96■□□□□ 0.31
LMO3Q8TAP4 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LMO3Q8TAP4 AC067863.1-201ENST00000494933 530 ntBASIC16.96■□□□□ 0.31
LMO3Q8TAP4 AC027369.6-201ENST00000525520 931 ntBASIC16.96■□□□□ 0.31
LMO3Q8TAP4 DUX4L27-201ENST00000554796 1261 ntBASIC16.96■□□□□ 0.31
LMO3Q8TAP4 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.96■□□□□ 0.31
LMO3Q8TAP4 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.96■□□□□ 0.31
LMO3Q8TAP4 AL590560.3-201ENST00000623350 461 ntBASIC16.96■□□□□ 0.31
LMO3Q8TAP4 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.96■□□□□ 0.31
LMO3Q8TAP4 AF228730.6-201ENST00000641497 218 ntBASIC16.96■□□□□ 0.31
LMO3Q8TAP4 AC084121.3-201ENST00000641716 218 ntBASIC16.96■□□□□ 0.31
LMO3Q8TAP4 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
LMO3Q8TAP4 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.96■□□□□ 0.31
LMO3Q8TAP4 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.96■□□□□ 0.31
LMO3Q8TAP4 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
LMO3Q8TAP4 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LMO3Q8TAP4 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
LMO3Q8TAP4 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.96■□□□□ 0.3
LMO3Q8TAP4 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
LMO3Q8TAP4 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
LMO3Q8TAP4 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.96■□□□□ 0.3
LMO3Q8TAP4 AC087499.5-201ENST00000452760 1342 ntBASIC16.96■□□□□ 0.3
LMO3Q8TAP4 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.95■□□□□ 0.3
LMO3Q8TAP4 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LMO3Q8TAP4 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
LMO3Q8TAP4 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LMO3Q8TAP4 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
LMO3Q8TAP4 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
LMO3Q8TAP4 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms