Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.09□□□□□ -0.15
DNAAF1Q8NEP3 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
DNAAF1Q8NEP3 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
DNAAF1Q8NEP3 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
DNAAF1Q8NEP3 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.09□□□□□ -0.15
DNAAF1Q8NEP3 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.09□□□□□ -0.15
DNAAF1Q8NEP3 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.09□□□□□ -0.15
DNAAF1Q8NEP3 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
DNAAF1Q8NEP3 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
DNAAF1Q8NEP3 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
DNAAF1Q8NEP3 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
DNAAF1Q8NEP3 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
DNAAF1Q8NEP3 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
DNAAF1Q8NEP3 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
DNAAF1Q8NEP3 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
DNAAF1Q8NEP3 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
DNAAF1Q8NEP3 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.09□□□□□ -0.15
DNAAF1Q8NEP3 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
DNAAF1Q8NEP3 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
DNAAF1Q8NEP3 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
DNAAF1Q8NEP3 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
DNAAF1Q8NEP3 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
DNAAF1Q8NEP3 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.09□□□□□ -0.15
DNAAF1Q8NEP3 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
DNAAF1Q8NEP3 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.09□□□□□ -0.15
DNAAF1Q8NEP3 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
DNAAF1Q8NEP3 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
DNAAF1Q8NEP3 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.09□□□□□ -0.15
DNAAF1Q8NEP3 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.15
DNAAF1Q8NEP3 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.08□□□□□ -0.15
DNAAF1Q8NEP3 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
DNAAF1Q8NEP3 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
DNAAF1Q8NEP3 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
DNAAF1Q8NEP3 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
DNAAF1Q8NEP3 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
DNAAF1Q8NEP3 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.08□□□□□ -0.16
DNAAF1Q8NEP3 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
DNAAF1Q8NEP3 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
DNAAF1Q8NEP3 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
DNAAF1Q8NEP3 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
DNAAF1Q8NEP3 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.08□□□□□ -0.16
DNAAF1Q8NEP3 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
DNAAF1Q8NEP3 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
DNAAF1Q8NEP3 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
DNAAF1Q8NEP3 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.08□□□□□ -0.16
DNAAF1Q8NEP3 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
DNAAF1Q8NEP3 AC106881.1-201ENST00000605849 3329 ntBASIC14.08□□□□□ -0.16
DNAAF1Q8NEP3 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
DNAAF1Q8NEP3 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
DNAAF1Q8NEP3 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.08□□□□□ -0.16
DNAAF1Q8NEP3 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.08□□□□□ -0.16
DNAAF1Q8NEP3 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.16
DNAAF1Q8NEP3 HAUS4P1-201ENST00000406739 1145 ntBASIC14.08□□□□□ -0.16
DNAAF1Q8NEP3 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.08□□□□□ -0.16
DNAAF1Q8NEP3 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.08□□□□□ -0.16
DNAAF1Q8NEP3 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
DNAAF1Q8NEP3 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.08□□□□□ -0.16
DNAAF1Q8NEP3 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.08□□□□□ -0.16
DNAAF1Q8NEP3 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
DNAAF1Q8NEP3 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.08□□□□□ -0.16
DNAAF1Q8NEP3 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.08□□□□□ -0.16
DNAAF1Q8NEP3 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
DNAAF1Q8NEP3 AP002469.2-201ENST00000531724 424 ntBASIC14.08□□□□□ -0.16
DNAAF1Q8NEP3 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.08□□□□□ -0.16
DNAAF1Q8NEP3 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.08□□□□□ -0.16
DNAAF1Q8NEP3 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.08□□□□□ -0.16
DNAAF1Q8NEP3 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
DNAAF1Q8NEP3 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.08□□□□□ -0.16
DNAAF1Q8NEP3 CICP24-201ENST00000605464 2705 ntBASIC14.08□□□□□ -0.16
DNAAF1Q8NEP3 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
DNAAF1Q8NEP3 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
DNAAF1Q8NEP3 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
DNAAF1Q8NEP3 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
DNAAF1Q8NEP3 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
DNAAF1Q8NEP3 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.08□□□□□ -0.16
DNAAF1Q8NEP3 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
DNAAF1Q8NEP3 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
DNAAF1Q8NEP3 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
DNAAF1Q8NEP3 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
DNAAF1Q8NEP3 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
DNAAF1Q8NEP3 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
DNAAF1Q8NEP3 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.08□□□□□ -0.16
DNAAF1Q8NEP3 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
DNAAF1Q8NEP3 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
DNAAF1Q8NEP3 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.16
DNAAF1Q8NEP3 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.08□□□□□ -0.16
DNAAF1Q8NEP3 TCAF2P1-201ENST00000291129 2421 ntBASIC14.07□□□□□ -0.16
DNAAF1Q8NEP3 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
DNAAF1Q8NEP3 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.07□□□□□ -0.16
DNAAF1Q8NEP3 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
DNAAF1Q8NEP3 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
DNAAF1Q8NEP3 C8orf49-201ENST00000525043 1968 ntBASIC14.07□□□□□ -0.16
DNAAF1Q8NEP3 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
DNAAF1Q8NEP3 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
DNAAF1Q8NEP3 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
DNAAF1Q8NEP3 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
DNAAF1Q8NEP3 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
DNAAF1Q8NEP3 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
DNAAF1Q8NEP3 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
DNAAF1Q8NEP3 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms