Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 AP001505.2-201ENST00000616815 443 ntBASIC14.64□□□□□ -0.07
COL27A1Q8IZC6 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.64□□□□□ -0.07
COL27A1Q8IZC6 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
COL27A1Q8IZC6 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
COL27A1Q8IZC6 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
COL27A1Q8IZC6 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
COL27A1Q8IZC6 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.64□□□□□ -0.07
COL27A1Q8IZC6 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
COL27A1Q8IZC6 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
COL27A1Q8IZC6 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
COL27A1Q8IZC6 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
COL27A1Q8IZC6 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
COL27A1Q8IZC6 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
COL27A1Q8IZC6 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
COL27A1Q8IZC6 LRRC59-203ENST00000576448 1531 ntBASIC14.63□□□□□ -0.07
COL27A1Q8IZC6 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
COL27A1Q8IZC6 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.63□□□□□ -0.07
COL27A1Q8IZC6 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC14.63□□□□□ -0.07
COL27A1Q8IZC6 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.63□□□□□ -0.07
COL27A1Q8IZC6 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC14.63□□□□□ -0.07
COL27A1Q8IZC6 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.63□□□□□ -0.07
COL27A1Q8IZC6 IMP3P2-201ENST00000489760 475 ntBASIC14.63□□□□□ -0.07
COL27A1Q8IZC6 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.63□□□□□ -0.07
COL27A1Q8IZC6 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC14.63□□□□□ -0.07
COL27A1Q8IZC6 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC14.63□□□□□ -0.07
COL27A1Q8IZC6 ZACNP1-201ENST00000612259 710 ntBASIC14.63□□□□□ -0.07
COL27A1Q8IZC6 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
COL27A1Q8IZC6 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.63□□□□□ -0.07
COL27A1Q8IZC6 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
COL27A1Q8IZC6 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
COL27A1Q8IZC6 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
COL27A1Q8IZC6 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14.63□□□□□ -0.07
COL27A1Q8IZC6 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
COL27A1Q8IZC6 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
COL27A1Q8IZC6 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
COL27A1Q8IZC6 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.63□□□□□ -0.07
COL27A1Q8IZC6 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
COL27A1Q8IZC6 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
COL27A1Q8IZC6 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
COL27A1Q8IZC6 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.63□□□□□ -0.07
COL27A1Q8IZC6 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
COL27A1Q8IZC6 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
COL27A1Q8IZC6 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
COL27A1Q8IZC6 HINT2P1-201ENST00000419438 481 ntBASIC14.63□□□□□ -0.07
COL27A1Q8IZC6 HLA-K-203ENST00000430151 1046 ntBASIC14.63□□□□□ -0.07
COL27A1Q8IZC6 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC14.63□□□□□ -0.07
COL27A1Q8IZC6 AC100850.1-201ENST00000506768 649 ntBASIC14.63□□□□□ -0.07
COL27A1Q8IZC6 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.63□□□□□ -0.07
COL27A1Q8IZC6 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
COL27A1Q8IZC6 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC14.63□□□□□ -0.07
COL27A1Q8IZC6 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
COL27A1Q8IZC6 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
COL27A1Q8IZC6 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.63□□□□□ -0.07
COL27A1Q8IZC6 AL645939.5-201ENST00000606834 243 ntBASIC14.63□□□□□ -0.07
COL27A1Q8IZC6 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
COL27A1Q8IZC6 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
COL27A1Q8IZC6 AC084364.1-201ENST00000551967 1556 ntBASIC14.63□□□□□ -0.07
COL27A1Q8IZC6 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
COL27A1Q8IZC6 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
COL27A1Q8IZC6 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
COL27A1Q8IZC6 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
COL27A1Q8IZC6 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
COL27A1Q8IZC6 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
COL27A1Q8IZC6 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.62□□□□□ -0.07
COL27A1Q8IZC6 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
COL27A1Q8IZC6 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
COL27A1Q8IZC6 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
COL27A1Q8IZC6 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
COL27A1Q8IZC6 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
COL27A1Q8IZC6 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
COL27A1Q8IZC6 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
COL27A1Q8IZC6 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.62□□□□□ -0.07
COL27A1Q8IZC6 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
COL27A1Q8IZC6 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
COL27A1Q8IZC6 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
COL27A1Q8IZC6 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC14.62□□□□□ -0.07
COL27A1Q8IZC6 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
COL27A1Q8IZC6 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC14.62□□□□□ -0.07
COL27A1Q8IZC6 SPTLC1P5-201ENST00000450718 252 ntBASIC14.62□□□□□ -0.07
COL27A1Q8IZC6 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC14.62□□□□□ -0.07
COL27A1Q8IZC6 AC004066.1-201ENST00000502488 802 ntBASIC14.62□□□□□ -0.07
COL27A1Q8IZC6 COG4-212ENST00000564653 590 ntTSL 5 BASIC14.62□□□□□ -0.07
COL27A1Q8IZC6 DUX4L47-201ENST00000566374 394 ntBASIC14.62□□□□□ -0.07
COL27A1Q8IZC6 SAMD11P1-201ENST00000571429 661 ntBASIC14.62□□□□□ -0.07
COL27A1Q8IZC6 RN7SL190P-201ENST00000582519 257 ntBASIC14.62□□□□□ -0.07
COL27A1Q8IZC6 NKG7-204ENST00000595217 816 ntTSL 2 BASIC14.62□□□□□ -0.07
COL27A1Q8IZC6 AF254983.2-201ENST00000612331 135 ntBASIC14.62□□□□□ -0.07
COL27A1Q8IZC6 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
COL27A1Q8IZC6 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
COL27A1Q8IZC6 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
COL27A1Q8IZC6 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
COL27A1Q8IZC6 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
COL27A1Q8IZC6 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.62□□□□□ -0.07
COL27A1Q8IZC6 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
COL27A1Q8IZC6 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
COL27A1Q8IZC6 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
COL27A1Q8IZC6 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC14.61□□□□□ -0.07
COL27A1Q8IZC6 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
COL27A1Q8IZC6 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
COL27A1Q8IZC6 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms