Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC116Q8IYX3 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC116Q8IYX3 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC116Q8IYX3 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
CCDC116Q8IYX3 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ 0
CCDC116Q8IYX3 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.05■□□□□ 0
CCDC116Q8IYX3 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
CCDC116Q8IYX3 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CCDC116Q8IYX3 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
CCDC116Q8IYX3 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.05■□□□□ 0
CCDC116Q8IYX3 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CCDC116Q8IYX3 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.05■□□□□ -0
CCDC116Q8IYX3 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.05■□□□□ -0
CCDC116Q8IYX3 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
CCDC116Q8IYX3 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.05■□□□□ -0
CCDC116Q8IYX3 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CCDC116Q8IYX3 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.05■□□□□ -0
CCDC116Q8IYX3 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.05■□□□□ -0
CCDC116Q8IYX3 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.05■□□□□ -0
CCDC116Q8IYX3 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.05■□□□□ -0
CCDC116Q8IYX3 AC105021.1-202ENST00000570572 669 ntBASIC15.05■□□□□ -0
CCDC116Q8IYX3 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.05■□□□□ -0
CCDC116Q8IYX3 AC023511.2-201ENST00000618803 211 ntBASIC15.05■□□□□ -0
CCDC116Q8IYX3 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC15.05■□□□□ -0
CCDC116Q8IYX3 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CCDC116Q8IYX3 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.05■□□□□ -0
CCDC116Q8IYX3 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
CCDC116Q8IYX3 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.05■□□□□ -0
CCDC116Q8IYX3 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CCDC116Q8IYX3 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
CCDC116Q8IYX3 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
CCDC116Q8IYX3 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CCDC116Q8IYX3 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.05■□□□□ -0
CCDC116Q8IYX3 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CCDC116Q8IYX3 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.05■□□□□ -0
CCDC116Q8IYX3 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CCDC116Q8IYX3 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CCDC116Q8IYX3 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CCDC116Q8IYX3 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.05■□□□□ -0
CCDC116Q8IYX3 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
CCDC116Q8IYX3 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
CCDC116Q8IYX3 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
CCDC116Q8IYX3 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.05■□□□□ -0
CCDC116Q8IYX3 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.05■□□□□ -0
CCDC116Q8IYX3 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
CCDC116Q8IYX3 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CCDC116Q8IYX3 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.04■□□□□ -0
CCDC116Q8IYX3 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
CCDC116Q8IYX3 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CCDC116Q8IYX3 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
CCDC116Q8IYX3 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CCDC116Q8IYX3 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.04■□□□□ -0
CCDC116Q8IYX3 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CCDC116Q8IYX3 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.04■□□□□ -0
CCDC116Q8IYX3 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CCDC116Q8IYX3 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CCDC116Q8IYX3 AC092850.2-201ENST00000623821 2697 ntBASIC15.04■□□□□ -0
CCDC116Q8IYX3 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CCDC116Q8IYX3 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CCDC116Q8IYX3 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.04■□□□□ -0
CCDC116Q8IYX3 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.04■□□□□ -0
CCDC116Q8IYX3 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CCDC116Q8IYX3 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CCDC116Q8IYX3 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.04■□□□□ -0
CCDC116Q8IYX3 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CCDC116Q8IYX3 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.04■□□□□ -0
CCDC116Q8IYX3 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CCDC116Q8IYX3 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CCDC116Q8IYX3 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.04■□□□□ -0
CCDC116Q8IYX3 LST1-205ENST00000376089 680 ntTSL 1 (best) BASIC15.04■□□□□ -0
CCDC116Q8IYX3 LST1-206ENST00000376090 689 ntTSL 2 BASIC15.04■□□□□ -0
CCDC116Q8IYX3 LST1-208ENST00000376093 648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CCDC116Q8IYX3 LST1-209ENST00000376096 565 ntTSL 2 BASIC15.04■□□□□ -0
CCDC116Q8IYX3 LST1-210ENST00000376099 610 ntTSL 2 BASIC15.04■□□□□ -0
CCDC116Q8IYX3 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.04■□□□□ -0
CCDC116Q8IYX3 LST1-212ENST00000396101 459 ntTSL 1 (best) BASIC15.04■□□□□ -0
CCDC116Q8IYX3 LST1-214ENST00000418507 726 ntTSL 2 BASIC15.04■□□□□ -0
CCDC116Q8IYX3 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.04■□□□□ -0
CCDC116Q8IYX3 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.04■□□□□ -0
CCDC116Q8IYX3 LST1-217ENST00000438075 764 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CCDC116Q8IYX3 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.04■□□□□ -0
CCDC116Q8IYX3 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.04■□□□□ -0
CCDC116Q8IYX3 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.04■□□□□ -0
CCDC116Q8IYX3 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.04■□□□□ -0
CCDC116Q8IYX3 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.04■□□□□ -0
CCDC116Q8IYX3 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.04■□□□□ -0
CCDC116Q8IYX3 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.04■□□□□ -0
CCDC116Q8IYX3 MIR4453-201ENST00000584019 89 ntBASIC15.04■□□□□ -0
CCDC116Q8IYX3 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.04■□□□□ -0
CCDC116Q8IYX3 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.04■□□□□ -0
CCDC116Q8IYX3 AC027612.4-201ENST00000605371 583 ntBASIC15.04■□□□□ -0
CCDC116Q8IYX3 AL691403.2-201ENST00000618460 490 ntBASIC15.04■□□□□ -0
CCDC116Q8IYX3 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.04■□□□□ -0
CCDC116Q8IYX3 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
CCDC116Q8IYX3 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CCDC116Q8IYX3 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.04■□□□□ -0
CCDC116Q8IYX3 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CCDC116Q8IYX3 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CCDC116Q8IYX3 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CCDC116Q8IYX3 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms