Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
COL23A1Q86Y22 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.64■□□□□ 0.74
COL23A1Q86Y22 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL23A1Q86Y22 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL23A1Q86Y22 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.64■□□□□ 0.73
COL23A1Q86Y22 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.64■□□□□ 0.73
COL23A1Q86Y22 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL23A1Q86Y22 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
COL23A1Q86Y22 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COL23A1Q86Y22 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC19.64■□□□□ 0.73
COL23A1Q86Y22 NDUFAB1P1-201ENST00000404262 460 ntBASIC19.64■□□□□ 0.73
COL23A1Q86Y22 AC007274.2-201ENST00000421675 662 ntBASIC19.64■□□□□ 0.73
COL23A1Q86Y22 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC19.64■□□□□ 0.73
COL23A1Q86Y22 AL596276.2-201ENST00000447525 331 ntBASIC19.64■□□□□ 0.73
COL23A1Q86Y22 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC19.64■□□□□ 0.73
COL23A1Q86Y22 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC19.64■□□□□ 0.73
COL23A1Q86Y22 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC19.64■□□□□ 0.73
COL23A1Q86Y22 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC19.64■□□□□ 0.73
COL23A1Q86Y22 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COL23A1Q86Y22 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC19.64■□□□□ 0.73
COL23A1Q86Y22 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC19.64■□□□□ 0.73
COL23A1Q86Y22 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COL23A1Q86Y22 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL23A1Q86Y22 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
COL23A1Q86Y22 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC19.64■□□□□ 0.73
COL23A1Q86Y22 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC19.64■□□□□ 0.73
COL23A1Q86Y22 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COL23A1Q86Y22 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC19.64■□□□□ 0.73
COL23A1Q86Y22 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
COL23A1Q86Y22 RNF216P1-203ENST00000404404 2427 ntBASIC19.64■□□□□ 0.73
COL23A1Q86Y22 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL23A1Q86Y22 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL23A1Q86Y22 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.64■□□□□ 0.73
COL23A1Q86Y22 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL23A1Q86Y22 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.63■□□□□ 0.73
COL23A1Q86Y22 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL23A1Q86Y22 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL23A1Q86Y22 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL23A1Q86Y22 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
COL23A1Q86Y22 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COL23A1Q86Y22 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL23A1Q86Y22 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC19.63■□□□□ 0.73
COL23A1Q86Y22 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL23A1Q86Y22 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC19.63■□□□□ 0.73
COL23A1Q86Y22 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL23A1Q86Y22 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COL23A1Q86Y22 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL23A1Q86Y22 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL23A1Q86Y22 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC19.63■□□□□ 0.73
COL23A1Q86Y22 PARVG-202ENST00000415224 999 ntTSL 2 BASIC19.63■□□□□ 0.73
COL23A1Q86Y22 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC19.63■□□□□ 0.73
COL23A1Q86Y22 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL23A1Q86Y22 FAM8A4P-201ENST00000435433 1213 ntBASIC19.63■□□□□ 0.73
COL23A1Q86Y22 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC19.63■□□□□ 0.73
COL23A1Q86Y22 AC012618.1-201ENST00000461223 412 ntBASIC19.63■□□□□ 0.73
COL23A1Q86Y22 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC19.63■□□□□ 0.73
COL23A1Q86Y22 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC19.63■□□□□ 0.73
COL23A1Q86Y22 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL23A1Q86Y22 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL23A1Q86Y22 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL23A1Q86Y22 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
COL23A1Q86Y22 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL23A1Q86Y22 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
COL23A1Q86Y22 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
COL23A1Q86Y22 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL23A1Q86Y22 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.63■□□□□ 0.73
COL23A1Q86Y22 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC19.63■□□□□ 0.73
COL23A1Q86Y22 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
COL23A1Q86Y22 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.62■□□□□ 0.73
COL23A1Q86Y22 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC19.62■□□□□ 0.73
COL23A1Q86Y22 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL23A1Q86Y22 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
COL23A1Q86Y22 AC139713.2-201ENST00000641328 2723 ntBASIC19.62■□□□□ 0.73
COL23A1Q86Y22 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
COL23A1Q86Y22 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC19.62■□□□□ 0.73
COL23A1Q86Y22 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL23A1Q86Y22 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL23A1Q86Y22 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL23A1Q86Y22 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL23A1Q86Y22 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC19.62■□□□□ 0.73
COL23A1Q86Y22 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL23A1Q86Y22 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL23A1Q86Y22 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC19.62■□□□□ 0.73
COL23A1Q86Y22 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL23A1Q86Y22 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL23A1Q86Y22 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL23A1Q86Y22 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC19.62■□□□□ 0.73
COL23A1Q86Y22 ENPP7P14-201ENST00000621765 1040 ntBASIC19.62■□□□□ 0.73
COL23A1Q86Y22 AC022748.3-201ENST00000621828 275 ntBASIC19.62■□□□□ 0.73
COL23A1Q86Y22 HLA-C-210ENST00000640219 976 ntBASIC19.62■□□□□ 0.73
COL23A1Q86Y22 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL23A1Q86Y22 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL23A1Q86Y22 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL23A1Q86Y22 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL23A1Q86Y22 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
COL23A1Q86Y22 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL23A1Q86Y22 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
COL23A1Q86Y22 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL23A1Q86Y22 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL23A1Q86Y22 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms