Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.05■□□□□ 0.16
DENND4AQ7Z401 AC104457.1-201ENST00000401024 814 ntBASIC16.05■□□□□ 0.16
DENND4AQ7Z401 AC016700.1-201ENST00000429424 312 ntBASIC16.05■□□□□ 0.16
DENND4AQ7Z401 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
DENND4AQ7Z401 EIF3FP3-201ENST00000434851 1086 ntBASIC16.05■□□□□ 0.16
DENND4AQ7Z401 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.05■□□□□ 0.16
DENND4AQ7Z401 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC16.05■□□□□ 0.16
DENND4AQ7Z401 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC16.05■□□□□ 0.16
DENND4AQ7Z401 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC16.05■□□□□ 0.16
DENND4AQ7Z401 BX539320.1-201ENST00000623759 877 ntBASIC16.05■□□□□ 0.16
DENND4AQ7Z401 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.05■□□□□ 0.16
DENND4AQ7Z401 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
DENND4AQ7Z401 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
DENND4AQ7Z401 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
DENND4AQ7Z401 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
DENND4AQ7Z401 PRORSD1P-202ENST00000563365 2154 ntBASIC16.05■□□□□ 0.16
DENND4AQ7Z401 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
DENND4AQ7Z401 AD000864.1-201ENST00000624076 2295 ntBASIC16.05■□□□□ 0.16
DENND4AQ7Z401 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
DENND4AQ7Z401 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
DENND4AQ7Z401 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
DENND4AQ7Z401 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DENND4AQ7Z401 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
DENND4AQ7Z401 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
DENND4AQ7Z401 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.05■□□□□ 0.16
DENND4AQ7Z401 MPV17-205ENST00000402310 906 ntTSL 5 BASIC16.05■□□□□ 0.16
DENND4AQ7Z401 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
DENND4AQ7Z401 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC16.05■□□□□ 0.16
DENND4AQ7Z401 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC16.05■□□□□ 0.16
DENND4AQ7Z401 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC16.05■□□□□ 0.16
DENND4AQ7Z401 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC16.05■□□□□ 0.16
DENND4AQ7Z401 AL391280.1-201ENST00000506969 1062 ntBASIC16.05■□□□□ 0.16
DENND4AQ7Z401 AC104982.3-201ENST00000581995 514 ntBASIC16.05■□□□□ 0.16
DENND4AQ7Z401 ETV2-208ENST00000621247 941 ntTSL 5 BASIC16.05■□□□□ 0.16
DENND4AQ7Z401 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC16.05■□□□□ 0.16
DENND4AQ7Z401 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
DENND4AQ7Z401 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.05■□□□□ 0.16
DENND4AQ7Z401 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
DENND4AQ7Z401 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DENND4AQ7Z401 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DENND4AQ7Z401 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
DENND4AQ7Z401 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DENND4AQ7Z401 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
DENND4AQ7Z401 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.05■□□□□ 0.16
DENND4AQ7Z401 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DENND4AQ7Z401 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
DENND4AQ7Z401 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DENND4AQ7Z401 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
DENND4AQ7Z401 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DENND4AQ7Z401 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.04■□□□□ 0.16
DENND4AQ7Z401 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
DENND4AQ7Z401 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DENND4AQ7Z401 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
DENND4AQ7Z401 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
DENND4AQ7Z401 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DENND4AQ7Z401 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
DENND4AQ7Z401 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DENND4AQ7Z401 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
DENND4AQ7Z401 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
DENND4AQ7Z401 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC16.04■□□□□ 0.16
DENND4AQ7Z401 GHSR-202ENST00000427970 912 ntBASIC16.04■□□□□ 0.16
DENND4AQ7Z401 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC16.04■□□□□ 0.16
DENND4AQ7Z401 PTPA-217ENST00000434095 870 ntTSL 2 BASIC16.04■□□□□ 0.16
DENND4AQ7Z401 FAM8A4P-201ENST00000435433 1213 ntBASIC16.04■□□□□ 0.16
DENND4AQ7Z401 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.04■□□□□ 0.16
DENND4AQ7Z401 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC16.04■□□□□ 0.16
DENND4AQ7Z401 PPY2P-201ENST00000582808 702 ntBASIC16.04■□□□□ 0.16
DENND4AQ7Z401 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
DENND4AQ7Z401 NKG7-204ENST00000595217 816 ntTSL 2 BASIC16.04■□□□□ 0.16
DENND4AQ7Z401 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC16.04■□□□□ 0.16
DENND4AQ7Z401 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC16.04■□□□□ 0.16
DENND4AQ7Z401 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.04■□□□□ 0.16
DENND4AQ7Z401 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DENND4AQ7Z401 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DENND4AQ7Z401 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
DENND4AQ7Z401 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
DENND4AQ7Z401 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
DENND4AQ7Z401 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC16.04■□□□□ 0.16
DENND4AQ7Z401 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC16.04■□□□□ 0.16
DENND4AQ7Z401 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DENND4AQ7Z401 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
DENND4AQ7Z401 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
DENND4AQ7Z401 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
DENND4AQ7Z401 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.03■□□□□ 0.16
DENND4AQ7Z401 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
DENND4AQ7Z401 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
DENND4AQ7Z401 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC16.03■□□□□ 0.16
DENND4AQ7Z401 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
DENND4AQ7Z401 NKAIN1P1-201ENST00000435754 582 ntBASIC16.03■□□□□ 0.16
DENND4AQ7Z401 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC16.03■□□□□ 0.16
DENND4AQ7Z401 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC16.03■□□□□ 0.16
DENND4AQ7Z401 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.03■□□□□ 0.16
DENND4AQ7Z401 MIR4706-201ENST00000582134 82 ntBASIC16.03■□□□□ 0.16
DENND4AQ7Z401 NAT9-224ENST00000583757 583 ntTSL 3 BASIC16.03■□□□□ 0.16
DENND4AQ7Z401 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC16.03■□□□□ 0.16
DENND4AQ7Z401 SPCS2P2-201ENST00000603270 608 ntBASIC16.03■□□□□ 0.16
DENND4AQ7Z401 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.03■□□□□ 0.16
DENND4AQ7Z401 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
DENND4AQ7Z401 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
DENND4AQ7Z401 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms