Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC12.1□□□□□ -0.47
MRPL54Q6P161 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC12.1□□□□□ -0.47
MRPL54Q6P161 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
MRPL54Q6P161 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
MRPL54Q6P161 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC12.1□□□□□ -0.47
MRPL54Q6P161 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
MRPL54Q6P161 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
MRPL54Q6P161 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC12.1□□□□□ -0.47
MRPL54Q6P161 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
MRPL54Q6P161 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
MRPL54Q6P161 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
MRPL54Q6P161 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
MRPL54Q6P161 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
MRPL54Q6P161 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC12.1□□□□□ -0.47
MRPL54Q6P161 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
MRPL54Q6P161 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
MRPL54Q6P161 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
MRPL54Q6P161 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC12.1□□□□□ -0.47
MRPL54Q6P161 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
MRPL54Q6P161 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL54Q6P161 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL54Q6P161 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL54Q6P161 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
MRPL54Q6P161 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
MRPL54Q6P161 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL54Q6P161 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.09□□□□□ -0.47
MRPL54Q6P161 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL54Q6P161 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC12.09□□□□□ -0.47
MRPL54Q6P161 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL54Q6P161 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL54Q6P161 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL54Q6P161 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC12.09□□□□□ -0.47
MRPL54Q6P161 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL54Q6P161 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL54Q6P161 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL54Q6P161 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL54Q6P161 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL54Q6P161 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL54Q6P161 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL54Q6P161 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL54Q6P161 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL54Q6P161 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC12.09□□□□□ -0.47
MRPL54Q6P161 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL54Q6P161 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL54Q6P161 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC12.09□□□□□ -0.47
MRPL54Q6P161 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL54Q6P161 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL54Q6P161 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC12.09□□□□□ -0.47
MRPL54Q6P161 CD70-202ENST00000423145 881 ntTSL 2 BASIC12.09□□□□□ -0.47
MRPL54Q6P161 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL54Q6P161 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC12.09□□□□□ -0.47
MRPL54Q6P161 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC12.09□□□□□ -0.47
MRPL54Q6P161 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL54Q6P161 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
MRPL54Q6P161 DHDH-203ENST00000522614 776 ntTSL 5 BASIC12.09□□□□□ -0.47
MRPL54Q6P161 EMC9-206ENST00000560403 872 ntTSL 2 BASIC12.09□□□□□ -0.47
MRPL54Q6P161 LINC01238-205ENST00000567549 1107 ntBASIC12.09□□□□□ -0.47
MRPL54Q6P161 RNF126P1-202ENST00000569893 925 ntBASIC12.09□□□□□ -0.47
MRPL54Q6P161 MIR4651-201ENST00000582622 73 ntBASIC12.09□□□□□ -0.47
MRPL54Q6P161 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC12.09□□□□□ -0.47
MRPL54Q6P161 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC12.09□□□□□ -0.47
MRPL54Q6P161 HADH-212ENST00000638621 741 ntTSL 5 BASIC12.09□□□□□ -0.47
MRPL54Q6P161 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL54Q6P161 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
MRPL54Q6P161 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL54Q6P161 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
MRPL54Q6P161 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL54Q6P161 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL54Q6P161 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL54Q6P161 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL54Q6P161 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL54Q6P161 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC12.09□□□□□ -0.47
MRPL54Q6P161 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
MRPL54Q6P161 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL54Q6P161 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL54Q6P161 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC12.09□□□□□ -0.47
MRPL54Q6P161 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL54Q6P161 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL54Q6P161 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC12.09□□□□□ -0.47
MRPL54Q6P161 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC12.09□□□□□ -0.47
MRPL54Q6P161 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL54Q6P161 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL54Q6P161 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL54Q6P161 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC12.09□□□□□ -0.47
MRPL54Q6P161 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
MRPL54Q6P161 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL54Q6P161 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
MRPL54Q6P161 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
MRPL54Q6P161 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
MRPL54Q6P161 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC12.08□□□□□ -0.47
MRPL54Q6P161 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC12.08□□□□□ -0.47
MRPL54Q6P161 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
MRPL54Q6P161 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC12.08□□□□□ -0.47
MRPL54Q6P161 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
MRPL54Q6P161 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
MRPL54Q6P161 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
MRPL54Q6P161 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
MRPL54Q6P161 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
MRPL54Q6P161 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC12.08□□□□□ -0.48
MRPL54Q6P161 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms