Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC19.71■□□□□ 0.75
RC3H1Q5TC82 NAT9-222ENST00000583476 583 ntTSL 3 BASIC19.71■□□□□ 0.75
RC3H1Q5TC82 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RC3H1Q5TC82 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC19.71■□□□□ 0.75
RC3H1Q5TC82 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RC3H1Q5TC82 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.71■□□□□ 0.75
RC3H1Q5TC82 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
RC3H1Q5TC82 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RC3H1Q5TC82 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RC3H1Q5TC82 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RC3H1Q5TC82 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
RC3H1Q5TC82 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RC3H1Q5TC82 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RC3H1Q5TC82 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RC3H1Q5TC82 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RC3H1Q5TC82 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC19.7■□□□□ 0.74
RC3H1Q5TC82 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
RC3H1Q5TC82 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC19.7■□□□□ 0.74
RC3H1Q5TC82 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RC3H1Q5TC82 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
RC3H1Q5TC82 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC19.7■□□□□ 0.74
RC3H1Q5TC82 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RC3H1Q5TC82 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RC3H1Q5TC82 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RC3H1Q5TC82 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RC3H1Q5TC82 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RC3H1Q5TC82 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
RC3H1Q5TC82 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RC3H1Q5TC82 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC19.7■□□□□ 0.74
RC3H1Q5TC82 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RC3H1Q5TC82 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RC3H1Q5TC82 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC19.7■□□□□ 0.74
RC3H1Q5TC82 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RC3H1Q5TC82 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RC3H1Q5TC82 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RC3H1Q5TC82 KLK11-210ENST00000600362 759 ntTSL 3 BASIC19.7■□□□□ 0.74
RC3H1Q5TC82 ENPP7P14-201ENST00000621765 1040 ntBASIC19.7■□□□□ 0.74
RC3H1Q5TC82 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RC3H1Q5TC82 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
RC3H1Q5TC82 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
RC3H1Q5TC82 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RC3H1Q5TC82 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC19.7■□□□□ 0.74
RC3H1Q5TC82 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
RC3H1Q5TC82 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
RC3H1Q5TC82 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.7■□□□□ 0.74
RC3H1Q5TC82 AC106886.4-201ENST00000623557 2502 ntBASIC19.7■□□□□ 0.74
RC3H1Q5TC82 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC19.7■□□□□ 0.74
RC3H1Q5TC82 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RC3H1Q5TC82 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RC3H1Q5TC82 MFF-204ENST00000353339 2186 ntTSL 5 BASIC19.7■□□□□ 0.74
RC3H1Q5TC82 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RC3H1Q5TC82 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RC3H1Q5TC82 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RC3H1Q5TC82 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RC3H1Q5TC82 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RC3H1Q5TC82 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC19.69■□□□□ 0.74
RC3H1Q5TC82 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RC3H1Q5TC82 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC19.69■□□□□ 0.74
RC3H1Q5TC82 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.69■□□□□ 0.74
RC3H1Q5TC82 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
RC3H1Q5TC82 RPS15-201ENST00000233609 534 ntTSL 2 BASIC19.69■□□□□ 0.74
RC3H1Q5TC82 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RC3H1Q5TC82 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RC3H1Q5TC82 AL645937.2-201ENST00000396808 931 ntBASIC19.69■□□□□ 0.74
RC3H1Q5TC82 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC19.69■□□□□ 0.74
RC3H1Q5TC82 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC19.69■□□□□ 0.74
RC3H1Q5TC82 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC19.69■□□□□ 0.74
RC3H1Q5TC82 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC19.69■□□□□ 0.74
RC3H1Q5TC82 RPS15-205ENST00000586686 562 ntTSL 5 BASIC19.69■□□□□ 0.74
RC3H1Q5TC82 RPS15-208ENST00000591804 711 ntTSL 5 BASIC19.69■□□□□ 0.74
RC3H1Q5TC82 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RC3H1Q5TC82 AC025181.2-201ENST00000606994 802 ntBASIC19.69■□□□□ 0.74
RC3H1Q5TC82 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC19.69■□□□□ 0.74
RC3H1Q5TC82 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RC3H1Q5TC82 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RC3H1Q5TC82 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RC3H1Q5TC82 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RC3H1Q5TC82 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RC3H1Q5TC82 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
RC3H1Q5TC82 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RC3H1Q5TC82 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RC3H1Q5TC82 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC19.69■□□□□ 0.74
RC3H1Q5TC82 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RC3H1Q5TC82 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC19.69■□□□□ 0.74
RC3H1Q5TC82 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RC3H1Q5TC82 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
RC3H1Q5TC82 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RC3H1Q5TC82 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
RC3H1Q5TC82 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC19.68■□□□□ 0.74
RC3H1Q5TC82 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RC3H1Q5TC82 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RC3H1Q5TC82 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC19.68■□□□□ 0.74
RC3H1Q5TC82 SNX21-203ENST00000372541 771 ntTSL 2 BASIC19.68■□□□□ 0.74
RC3H1Q5TC82 SMS-201ENST00000379404 1174 ntTSL 3 BASIC19.68■□□□□ 0.74
RC3H1Q5TC82 TISP43-201ENST00000409793 538 ntTSL 4 BASIC19.68■□□□□ 0.74
RC3H1Q5TC82 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
RC3H1Q5TC82 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC19.68■□□□□ 0.74
RC3H1Q5TC82 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC19.68■□□□□ 0.74
RC3H1Q5TC82 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RC3H1Q5TC82 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms