Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.72■□□□□ 0.27
PTPN20Q4JDL3 AC097493.3-201ENST00000509725 367 ntBASIC16.72■□□□□ 0.27
PTPN20Q4JDL3 AC010336.2-201ENST00000564226 506 ntBASIC16.72■□□□□ 0.27
PTPN20Q4JDL3 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.72■□□□□ 0.27
PTPN20Q4JDL3 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.72■□□□□ 0.27
PTPN20Q4JDL3 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN20Q4JDL3 HYMAI-201ENST00000635591 3347 ntBASIC16.72■□□□□ 0.27
PTPN20Q4JDL3 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN20Q4JDL3 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN20Q4JDL3 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN20Q4JDL3 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN20Q4JDL3 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.72■□□□□ 0.27
PTPN20Q4JDL3 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN20Q4JDL3 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN20Q4JDL3 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN20Q4JDL3 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.72■□□□□ 0.27
PTPN20Q4JDL3 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN20Q4JDL3 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
PTPN20Q4JDL3 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.72■□□□□ 0.27
PTPN20Q4JDL3 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN20Q4JDL3 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.72■□□□□ 0.27
PTPN20Q4JDL3 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.72■□□□□ 0.27
PTPN20Q4JDL3 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PTPN20Q4JDL3 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTPN20Q4JDL3 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTPN20Q4JDL3 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTPN20Q4JDL3 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PTPN20Q4JDL3 SSR4P1-203ENST00000599569 2260 ntBASIC16.71■□□□□ 0.27
PTPN20Q4JDL3 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.71■□□□□ 0.27
PTPN20Q4JDL3 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTPN20Q4JDL3 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
PTPN20Q4JDL3 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.71■□□□□ 0.27
PTPN20Q4JDL3 AC090616.6-203ENST00000579186 1945 ntBASIC16.71■□□□□ 0.27
PTPN20Q4JDL3 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTPN20Q4JDL3 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PTPN20Q4JDL3 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTPN20Q4JDL3 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PTPN20Q4JDL3 MIR943-201ENST00000401286 94 ntBASIC16.71■□□□□ 0.27
PTPN20Q4JDL3 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.71■□□□□ 0.27
PTPN20Q4JDL3 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.71■□□□□ 0.27
PTPN20Q4JDL3 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.71■□□□□ 0.27
PTPN20Q4JDL3 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
PTPN20Q4JDL3 SERBP1P3-201ENST00000459980 809 ntBASIC16.71■□□□□ 0.27
PTPN20Q4JDL3 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PTPN20Q4JDL3 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.71■□□□□ 0.27
PTPN20Q4JDL3 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.71■□□□□ 0.27
PTPN20Q4JDL3 AC027369.6-201ENST00000525520 931 ntBASIC16.71■□□□□ 0.27
PTPN20Q4JDL3 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.71■□□□□ 0.27
PTPN20Q4JDL3 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTPN20Q4JDL3 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.71■□□□□ 0.27
PTPN20Q4JDL3 AC025048.3-201ENST00000590609 569 ntBASIC16.71■□□□□ 0.27
PTPN20Q4JDL3 AC106028.4-201ENST00000614509 607 ntBASIC16.71■□□□□ 0.27
PTPN20Q4JDL3 AC005702.4-201ENST00000618393 416 ntBASIC16.71■□□□□ 0.27
PTPN20Q4JDL3 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTPN20Q4JDL3 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PTPN20Q4JDL3 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTPN20Q4JDL3 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PTPN20Q4JDL3 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PTPN20Q4JDL3 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
PTPN20Q4JDL3 AC092384.3-202ENST00000564646 2873 ntBASIC16.71■□□□□ 0.26
PTPN20Q4JDL3 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
PTPN20Q4JDL3 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN20Q4JDL3 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN20Q4JDL3 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.7■□□□□ 0.26
PTPN20Q4JDL3 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
PTPN20Q4JDL3 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN20Q4JDL3 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN20Q4JDL3 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN20Q4JDL3 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.7■□□□□ 0.26
PTPN20Q4JDL3 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.7■□□□□ 0.26
PTPN20Q4JDL3 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN20Q4JDL3 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
PTPN20Q4JDL3 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.7■□□□□ 0.26
PTPN20Q4JDL3 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN20Q4JDL3 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.7■□□□□ 0.26
PTPN20Q4JDL3 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.7■□□□□ 0.26
PTPN20Q4JDL3 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN20Q4JDL3 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN20Q4JDL3 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN20Q4JDL3 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.7■□□□□ 0.26
PTPN20Q4JDL3 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN20Q4JDL3 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN20Q4JDL3 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN20Q4JDL3 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.7■□□□□ 0.26
PTPN20Q4JDL3 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN20Q4JDL3 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.7■□□□□ 0.26
PTPN20Q4JDL3 AL645939.2-201ENST00000427340 991 ntBASIC16.7■□□□□ 0.26
PTPN20Q4JDL3 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN20Q4JDL3 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.7■□□□□ 0.26
PTPN20Q4JDL3 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.7■□□□□ 0.26
PTPN20Q4JDL3 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.7■□□□□ 0.26
PTPN20Q4JDL3 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.7■□□□□ 0.26
PTPN20Q4JDL3 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN20Q4JDL3 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.7■□□□□ 0.26
PTPN20Q4JDL3 AL844908.2-201ENST00000609461 460 ntBASIC16.7■□□□□ 0.26
PTPN20Q4JDL3 AC093512.1-201ENST00000617969 520 ntBASIC16.7■□□□□ 0.26
PTPN20Q4JDL3 MIR6069-201ENST00000620069 79 ntBASIC16.7■□□□□ 0.26
PTPN20Q4JDL3 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN20Q4JDL3 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.7■□□□□ 0.26
PTPN20Q4JDL3 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms