Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP1Q04837 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP1Q04837 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.5□□□□□ -0.25
SSBP1Q04837 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP1Q04837 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP1Q04837 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP1Q04837 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
SSBP1Q04837 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC13.5□□□□□ -0.25
SSBP1Q04837 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.5□□□□□ -0.25
SSBP1Q04837 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC13.5□□□□□ -0.25
SSBP1Q04837 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC13.5□□□□□ -0.25
SSBP1Q04837 AL589702.1-201ENST00000641229 1509 ntBASIC13.5□□□□□ -0.25
SSBP1Q04837 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP1Q04837 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP1Q04837 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP1Q04837 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.5□□□□□ -0.25
SSBP1Q04837 AC140479.7-201ENST00000636301 2332 ntBASIC13.5□□□□□ -0.25
SSBP1Q04837 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SSBP1Q04837 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
SSBP1Q04837 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
SSBP1Q04837 AL365209.1-201ENST00000624418 6473 ntBASIC13.5□□□□□ -0.25
SSBP1Q04837 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP1Q04837 EMD-201ENST00000369835 966 ntTSL 3 BASIC13.5□□□□□ -0.25
SSBP1Q04837 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
SSBP1Q04837 LAGE3P1-201ENST00000425356 484 ntBASIC13.5□□□□□ -0.25
SSBP1Q04837 GPX1P2-201ENST00000429271 606 ntBASIC13.5□□□□□ -0.25
SSBP1Q04837 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP1Q04837 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
SSBP1Q04837 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC13.5□□□□□ -0.25
SSBP1Q04837 AC243562.2-201ENST00000561247 970 ntBASIC13.5□□□□□ -0.25
SSBP1Q04837 IGHV3OR16-7-201ENST00000604106 360 ntBASIC13.5□□□□□ -0.25
SSBP1Q04837 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP1Q04837 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.5□□□□□ -0.25
SSBP1Q04837 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC13.5□□□□□ -0.25
SSBP1Q04837 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.5□□□□□ -0.25
SSBP1Q04837 AC116407.4-201ENST00000623319 1061 ntBASIC13.5□□□□□ -0.25
SSBP1Q04837 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP1Q04837 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP1Q04837 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP1Q04837 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
SSBP1Q04837 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.5□□□□□ -0.25
SSBP1Q04837 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.5□□□□□ -0.25
SSBP1Q04837 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.5□□□□□ -0.25
SSBP1Q04837 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SSBP1Q04837 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP1Q04837 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.5□□□□□ -0.25
SSBP1Q04837 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SSBP1Q04837 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.49□□□□□ -0.25
SSBP1Q04837 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SSBP1Q04837 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SSBP1Q04837 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
SSBP1Q04837 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SSBP1Q04837 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SSBP1Q04837 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.49□□□□□ -0.25
SSBP1Q04837 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.49□□□□□ -0.25
SSBP1Q04837 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SSBP1Q04837 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SSBP1Q04837 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
SSBP1Q04837 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
SSBP1Q04837 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SSBP1Q04837 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
SSBP1Q04837 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
SSBP1Q04837 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SSBP1Q04837 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SSBP1Q04837 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SSBP1Q04837 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
SSBP1Q04837 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SSBP1Q04837 CICP4-201ENST00000447359 2812 ntBASIC13.49□□□□□ -0.25
SSBP1Q04837 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SSBP1Q04837 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.49□□□□□ -0.25
SSBP1Q04837 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
SSBP1Q04837 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
SSBP1Q04837 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SSBP1Q04837 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC13.49□□□□□ -0.25
SSBP1Q04837 KRT18P34-201ENST00000488218 1270 ntBASIC13.49□□□□□ -0.25
SSBP1Q04837 CFL1-202ENST00000524553 860 ntTSL 2 BASIC13.49□□□□□ -0.25
SSBP1Q04837 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC13.49□□□□□ -0.25
SSBP1Q04837 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC13.49□□□□□ -0.25
SSBP1Q04837 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.49□□□□□ -0.25
SSBP1Q04837 AC002347.1-201ENST00000569543 541 ntBASIC13.49□□□□□ -0.25
SSBP1Q04837 MIR4313-201ENST00000580760 101 ntBASIC13.49□□□□□ -0.25
SSBP1Q04837 AC138894.3-201ENST00000603787 634 ntBASIC13.49□□□□□ -0.25
SSBP1Q04837 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC13.49□□□□□ -0.25
SSBP1Q04837 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
SSBP1Q04837 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC13.49□□□□□ -0.25
SSBP1Q04837 AL645728.2-201ENST00000641974 660 ntBASIC13.49□□□□□ -0.25
SSBP1Q04837 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SSBP1Q04837 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.49□□□□□ -0.25
SSBP1Q04837 AC067750.1-201ENST00000608826 6545 ntBASIC13.49□□□□□ -0.25
SSBP1Q04837 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SSBP1Q04837 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
SSBP1Q04837 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SSBP1Q04837 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
SSBP1Q04837 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SSBP1Q04837 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.49□□□□□ -0.25
SSBP1Q04837 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
SSBP1Q04837 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
SSBP1Q04837 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SSBP1Q04837 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.49□□□□□ -0.25
SSBP1Q04837 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms