Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.39□□□□□ -0.11
CDK5Q00535 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.39□□□□□ -0.11
CDK5Q00535 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.39□□□□□ -0.11
CDK5Q00535 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.39□□□□□ -0.11
CDK5Q00535 NORAD-201ENST00000565493 5339 ntBASIC14.39□□□□□ -0.11
CDK5Q00535 AC148477.4-201ENST00000613430 1793 ntBASIC14.39□□□□□ -0.11
CDK5Q00535 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDK5Q00535 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.39□□□□□ -0.11
CDK5Q00535 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CDK5Q00535 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDK5Q00535 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.39□□□□□ -0.11
CDK5Q00535 AC025580.3-201ENST00000617932 1424 ntBASIC14.39□□□□□ -0.11
CDK5Q00535 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDK5Q00535 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDK5Q00535 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.39□□□□□ -0.11
CDK5Q00535 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CDK5Q00535 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDK5Q00535 LINC00528-201ENST00000600723 2160 ntBASIC14.39□□□□□ -0.11
CDK5Q00535 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDK5Q00535 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
CDK5Q00535 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDK5Q00535 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.38□□□□□ -0.11
CDK5Q00535 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDK5Q00535 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDK5Q00535 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.38□□□□□ -0.11
CDK5Q00535 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDK5Q00535 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDK5Q00535 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDK5Q00535 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDK5Q00535 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.38□□□□□ -0.11
CDK5Q00535 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.38□□□□□ -0.11
CDK5Q00535 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDK5Q00535 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CDK5Q00535 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.38□□□□□ -0.11
CDK5Q00535 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDK5Q00535 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CDK5Q00535 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.38□□□□□ -0.11
CDK5Q00535 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDK5Q00535 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDK5Q00535 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDK5Q00535 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDK5Q00535 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.38□□□□□ -0.11
CDK5Q00535 MIR1224-201ENST00000408193 85 ntBASIC14.38□□□□□ -0.11
CDK5Q00535 AL031284.1-201ENST00000419297 478 ntBASIC14.38□□□□□ -0.11
CDK5Q00535 AC079781.3-201ENST00000449110 356 ntBASIC14.38□□□□□ -0.11
CDK5Q00535 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC14.38□□□□□ -0.11
CDK5Q00535 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC14.38□□□□□ -0.11
CDK5Q00535 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.38□□□□□ -0.11
CDK5Q00535 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDK5Q00535 AC004877.2-201ENST00000623941 599 ntBASIC14.38□□□□□ -0.11
CDK5Q00535 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.38□□□□□ -0.11
CDK5Q00535 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.38□□□□□ -0.11
CDK5Q00535 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDK5Q00535 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDK5Q00535 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDK5Q00535 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDK5Q00535 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDK5Q00535 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.38□□□□□ -0.11
CDK5Q00535 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDK5Q00535 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDK5Q00535 AC023024.2-201ENST00000623561 1993 ntBASIC14.38□□□□□ -0.11
CDK5Q00535 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDK5Q00535 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.38□□□□□ -0.11
CDK5Q00535 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.38□□□□□ -0.11
CDK5Q00535 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.38□□□□□ -0.11
CDK5Q00535 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDK5Q00535 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CDK5Q00535 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDK5Q00535 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
CDK5Q00535 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CDK5Q00535 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDK5Q00535 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDK5Q00535 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.37□□□□□ -0.11
CDK5Q00535 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.37□□□□□ -0.11
CDK5Q00535 FOXO1B-201ENST00000504678 1527 ntBASIC14.37□□□□□ -0.11
CDK5Q00535 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDK5Q00535 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDK5Q00535 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDK5Q00535 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDK5Q00535 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.37□□□□□ -0.11
CDK5Q00535 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDK5Q00535 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDK5Q00535 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDK5Q00535 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDK5Q00535 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.37□□□□□ -0.11
CDK5Q00535 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDK5Q00535 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CDK5Q00535 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.37□□□□□ -0.11
CDK5Q00535 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.37□□□□□ -0.11
CDK5Q00535 IGHV3-22-201ENST00000520721 359 ntBASIC14.37□□□□□ -0.11
CDK5Q00535 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
CDK5Q00535 AL138918.1-201ENST00000568306 659 ntBASIC14.37□□□□□ -0.11
CDK5Q00535 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.11
CDK5Q00535 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.37□□□□□ -0.11
CDK5Q00535 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.37□□□□□ -0.11
CDK5Q00535 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CDK5Q00535 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.37□□□□□ -0.11
CDK5Q00535 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDK5Q00535 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CDK5Q00535 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms