Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
EFNB1P98172 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
EFNB1P98172 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
EFNB1P98172 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
EFNB1P98172 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
EFNB1P98172 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
EFNB1P98172 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
EFNB1P98172 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
EFNB1P98172 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
EFNB1P98172 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
EFNB1P98172 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.22□□□□□ -0.13
EFNB1P98172 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.22□□□□□ -0.13
EFNB1P98172 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.21□□□□□ -0.13
EFNB1P98172 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
EFNB1P98172 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EFNB1P98172 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EFNB1P98172 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
EFNB1P98172 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
EFNB1P98172 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EFNB1P98172 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EFNB1P98172 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EFNB1P98172 BCAR1-209ENST00000546196 1340 ntBASIC14.21□□□□□ -0.13
EFNB1P98172 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.21□□□□□ -0.13
EFNB1P98172 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.21□□□□□ -0.13
EFNB1P98172 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.21□□□□□ -0.13
EFNB1P98172 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EFNB1P98172 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
EFNB1P98172 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.21□□□□□ -0.13
EFNB1P98172 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
EFNB1P98172 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
EFNB1P98172 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
EFNB1P98172 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EFNB1P98172 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
EFNB1P98172 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
EFNB1P98172 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
EFNB1P98172 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.21□□□□□ -0.13
EFNB1P98172 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.21□□□□□ -0.13
EFNB1P98172 HNRNPUP1-201ENST00000554987 333 ntBASIC14.21□□□□□ -0.13
EFNB1P98172 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
EFNB1P98172 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
EFNB1P98172 AC099522.2-201ENST00000607001 744 ntBASIC14.21□□□□□ -0.13
EFNB1P98172 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.21□□□□□ -0.13
EFNB1P98172 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
EFNB1P98172 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EFNB1P98172 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
EFNB1P98172 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.21□□□□□ -0.13
EFNB1P98172 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
EFNB1P98172 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
EFNB1P98172 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.21□□□□□ -0.14
EFNB1P98172 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
EFNB1P98172 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
EFNB1P98172 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
EFNB1P98172 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
EFNB1P98172 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
EFNB1P98172 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
EFNB1P98172 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.21□□□□□ -0.14
EFNB1P98172 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
EFNB1P98172 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
EFNB1P98172 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
EFNB1P98172 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB1P98172 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
EFNB1P98172 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.2□□□□□ -0.14
EFNB1P98172 AC140479.7-201ENST00000636301 2332 ntBASIC14.2□□□□□ -0.14
EFNB1P98172 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB1P98172 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.2□□□□□ -0.14
EFNB1P98172 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
EFNB1P98172 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB1P98172 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB1P98172 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.2□□□□□ -0.14
EFNB1P98172 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.2□□□□□ -0.14
EFNB1P98172 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB1P98172 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.2□□□□□ -0.14
EFNB1P98172 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB1P98172 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB1P98172 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.2□□□□□ -0.14
EFNB1P98172 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
EFNB1P98172 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB1P98172 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB1P98172 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
EFNB1P98172 FAM220BP-201ENST00000377689 816 ntBASIC14.2□□□□□ -0.14
EFNB1P98172 AC142381.1-201ENST00000426099 345 ntBASIC14.2□□□□□ -0.14
EFNB1P98172 KRT18P2-201ENST00000447938 1258 ntBASIC14.2□□□□□ -0.14
EFNB1P98172 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.2□□□□□ -0.14
EFNB1P98172 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.2□□□□□ -0.14
EFNB1P98172 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
EFNB1P98172 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.2□□□□□ -0.14
EFNB1P98172 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.2□□□□□ -0.14
EFNB1P98172 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB1P98172 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB1P98172 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB1P98172 CYP4F24P-201ENST00000586049 1580 ntBASIC14.2□□□□□ -0.14
EFNB1P98172 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
EFNB1P98172 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB1P98172 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB1P98172 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.2□□□□□ -0.14
EFNB1P98172 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB1P98172 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB1P98172 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB1P98172 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB1P98172 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms