Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
IRX3P78415 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
IRX3P78415 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
IRX3P78415 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
IRX3P78415 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
IRX3P78415 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
IRX3P78415 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
IRX3P78415 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.56■□□□□ 0.56
IRX3P78415 Z97205.2-201ENST00000564697 1639 ntBASIC18.56■□□□□ 0.56
IRX3P78415 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
IRX3P78415 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
IRX3P78415 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
IRX3P78415 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC18.56■□□□□ 0.56
IRX3P78415 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
IRX3P78415 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.56■□□□□ 0.56
IRX3P78415 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.56■□□□□ 0.56
IRX3P78415 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
IRX3P78415 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.56■□□□□ 0.56
IRX3P78415 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
IRX3P78415 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
IRX3P78415 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
IRX3P78415 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
IRX3P78415 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
IRX3P78415 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
IRX3P78415 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC18.56■□□□□ 0.56
IRX3P78415 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
IRX3P78415 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC18.56■□□□□ 0.56
IRX3P78415 ELP6-209ENST00000446787 894 ntTSL 3 BASIC18.56■□□□□ 0.56
IRX3P78415 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC18.56■□□□□ 0.56
IRX3P78415 CROCCP4-201ENST00000457096 498 ntBASIC18.56■□□□□ 0.56
IRX3P78415 RN7SL399P-201ENST00000471648 279 ntBASIC18.56■□□□□ 0.56
IRX3P78415 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC18.56■□□□□ 0.56
IRX3P78415 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18.56■□□□□ 0.56
IRX3P78415 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
IRX3P78415 SNX29P1-201ENST00000548357 1007 ntBASIC18.56■□□□□ 0.56
IRX3P78415 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC18.56■□□□□ 0.56
IRX3P78415 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
IRX3P78415 MIR6775-201ENST00000617557 69 ntBASIC18.56■□□□□ 0.56
IRX3P78415 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.56■□□□□ 0.56
IRX3P78415 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
IRX3P78415 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
IRX3P78415 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
IRX3P78415 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
IRX3P78415 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
IRX3P78415 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
IRX3P78415 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
IRX3P78415 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
IRX3P78415 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
IRX3P78415 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IRX3P78415 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IRX3P78415 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IRX3P78415 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
IRX3P78415 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
IRX3P78415 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IRX3P78415 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IRX3P78415 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
IRX3P78415 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
IRX3P78415 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
IRX3P78415 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IRX3P78415 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
IRX3P78415 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IRX3P78415 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IRX3P78415 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC18.55■□□□□ 0.56
IRX3P78415 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
IRX3P78415 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC18.55■□□□□ 0.56
IRX3P78415 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC18.55■□□□□ 0.56
IRX3P78415 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC18.55■□□□□ 0.56
IRX3P78415 LINC01115-203ENST00000606068 577 ntBASIC18.55■□□□□ 0.56
IRX3P78415 AL033527.4-201ENST00000641026 673 ntBASIC18.55■□□□□ 0.56
IRX3P78415 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.55■□□□□ 0.56
IRX3P78415 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC18.55■□□□□ 0.56
IRX3P78415 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
IRX3P78415 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IRX3P78415 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC18.55■□□□□ 0.56
IRX3P78415 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IRX3P78415 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.55■□□□□ 0.56
IRX3P78415 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
IRX3P78415 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC18.55■□□□□ 0.56
IRX3P78415 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.55■□□□□ 0.56
IRX3P78415 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
IRX3P78415 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
IRX3P78415 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.54■□□□□ 0.56
IRX3P78415 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IRX3P78415 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC18.54■□□□□ 0.56
IRX3P78415 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IRX3P78415 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IRX3P78415 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
IRX3P78415 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IRX3P78415 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IRX3P78415 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IRX3P78415 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IRX3P78415 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IRX3P78415 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC18.54■□□□□ 0.56
IRX3P78415 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC18.54■□□□□ 0.56
IRX3P78415 AC104989.1-201ENST00000519711 778 ntBASIC18.54■□□□□ 0.56
IRX3P78415 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC18.54■□□□□ 0.56
IRX3P78415 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC18.54■□□□□ 0.56
IRX3P78415 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC18.54■□□□□ 0.56
IRX3P78415 BTNL10-201ENST00000595971 695 ntBASIC18.54■□□□□ 0.56
IRX3P78415 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms