Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
IRX4P78413 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
IRX4P78413 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
IRX4P78413 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
IRX4P78413 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
IRX4P78413 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC16.66■□□□□ 0.26
IRX4P78413 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
IRX4P78413 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
IRX4P78413 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
IRX4P78413 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
IRX4P78413 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
IRX4P78413 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
IRX4P78413 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
IRX4P78413 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
IRX4P78413 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
IRX4P78413 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
IRX4P78413 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
IRX4P78413 MRPS18AP1-201ENST00000414458 589 ntBASIC16.66■□□□□ 0.26
IRX4P78413 RN7SL692P-201ENST00000464677 288 ntBASIC16.66■□□□□ 0.26
IRX4P78413 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.66■□□□□ 0.26
IRX4P78413 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
IRX4P78413 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
IRX4P78413 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.66■□□□□ 0.26
IRX4P78413 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.66■□□□□ 0.26
IRX4P78413 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.66■□□□□ 0.26
IRX4P78413 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
IRX4P78413 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
IRX4P78413 AC005412.3-201ENST00000580309 715 ntBASIC16.66■□□□□ 0.26
IRX4P78413 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.66■□□□□ 0.26
IRX4P78413 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.66■□□□□ 0.26
IRX4P78413 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
IRX4P78413 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
IRX4P78413 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.66■□□□□ 0.26
IRX4P78413 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
IRX4P78413 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
IRX4P78413 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
IRX4P78413 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.66■□□□□ 0.26
IRX4P78413 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
IRX4P78413 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
IRX4P78413 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.66■□□□□ 0.26
IRX4P78413 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
IRX4P78413 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
IRX4P78413 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.66■□□□□ 0.26
IRX4P78413 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
IRX4P78413 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
IRX4P78413 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
IRX4P78413 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
IRX4P78413 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.65■□□□□ 0.26
IRX4P78413 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
IRX4P78413 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
IRX4P78413 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
IRX4P78413 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
IRX4P78413 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
IRX4P78413 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
IRX4P78413 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
IRX4P78413 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
IRX4P78413 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.65■□□□□ 0.26
IRX4P78413 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.65■□□□□ 0.26
IRX4P78413 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
IRX4P78413 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
IRX4P78413 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
IRX4P78413 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
IRX4P78413 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
IRX4P78413 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.65■□□□□ 0.26
IRX4P78413 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
IRX4P78413 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
IRX4P78413 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
IRX4P78413 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
IRX4P78413 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.65■□□□□ 0.26
IRX4P78413 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.65■□□□□ 0.26
IRX4P78413 AC009118.2-201ENST00000613275 655 ntBASIC16.65■□□□□ 0.26
IRX4P78413 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.65■□□□□ 0.26
IRX4P78413 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.65■□□□□ 0.26
IRX4P78413 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
IRX4P78413 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
IRX4P78413 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
IRX4P78413 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
IRX4P78413 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
IRX4P78413 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.65■□□□□ 0.26
IRX4P78413 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
IRX4P78413 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.65■□□□□ 0.26
IRX4P78413 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
IRX4P78413 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
IRX4P78413 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
IRX4P78413 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
IRX4P78413 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
IRX4P78413 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.64■□□□□ 0.25
IRX4P78413 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
IRX4P78413 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IRX4P78413 WASH6P-202ENST00000359512 1437 ntBASIC16.64■□□□□ 0.25
IRX4P78413 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IRX4P78413 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IRX4P78413 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IRX4P78413 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.64■□□□□ 0.25
IRX4P78413 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.64■□□□□ 0.25
IRX4P78413 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IRX4P78413 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IRX4P78413 COX5BP8-201ENST00000416911 349 ntBASIC16.64■□□□□ 0.25
IRX4P78413 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
IRX4P78413 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms