Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEP78395 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.13■□□□□ 0.17
PRAMEP78395 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.13■□□□□ 0.17
PRAMEP78395 AC005237.2-201ENST00000434368 219 ntBASIC16.13■□□□□ 0.17
PRAMEP78395 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.13■□□□□ 0.17
PRAMEP78395 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEP78395 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.13■□□□□ 0.17
PRAMEP78395 SLC25A39P2-201ENST00000537614 270 ntBASIC16.13■□□□□ 0.17
PRAMEP78395 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.13■□□□□ 0.17
PRAMEP78395 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.13■□□□□ 0.17
PRAMEP78395 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEP78395 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEP78395 AC010327.4-202ENST00000591484 748 ntBASIC16.13■□□□□ 0.17
PRAMEP78395 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PRAMEP78395 AC105339.1-204ENST00000636249 355 ntBASIC16.13■□□□□ 0.17
PRAMEP78395 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEP78395 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PRAMEP78395 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
PRAMEP78395 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEP78395 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
PRAMEP78395 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
PRAMEP78395 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEP78395 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEP78395 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
PRAMEP78395 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PRAMEP78395 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEP78395 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEP78395 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEP78395 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PRAMEP78395 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.13■□□□□ 0.17
PRAMEP78395 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.13■□□□□ 0.17
PRAMEP78395 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEP78395 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEP78395 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEP78395 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEP78395 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PRAMEP78395 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PRAMEP78395 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRAMEP78395 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.12■□□□□ 0.17
PRAMEP78395 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
PRAMEP78395 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.12■□□□□ 0.17
PRAMEP78395 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRAMEP78395 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRAMEP78395 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.12■□□□□ 0.17
PRAMEP78395 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.12■□□□□ 0.17
PRAMEP78395 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.12■□□□□ 0.17
PRAMEP78395 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRAMEP78395 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.12■□□□□ 0.17
PRAMEP78395 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRAMEP78395 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRAMEP78395 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRAMEP78395 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRAMEP78395 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.12■□□□□ 0.17
PRAMEP78395 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.12■□□□□ 0.17
PRAMEP78395 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.12■□□□□ 0.17
PRAMEP78395 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.12■□□□□ 0.17
PRAMEP78395 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.12■□□□□ 0.17
PRAMEP78395 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.12■□□□□ 0.17
PRAMEP78395 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.12■□□□□ 0.17
PRAMEP78395 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRAMEP78395 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.12■□□□□ 0.17
PRAMEP78395 AC022145.2-201ENST00000598203 171 ntBASIC16.12■□□□□ 0.17
PRAMEP78395 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.12■□□□□ 0.17
PRAMEP78395 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.12■□□□□ 0.17
PRAMEP78395 AC055717.3-201ENST00000622967 595 ntBASIC16.12■□□□□ 0.17
PRAMEP78395 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PRAMEP78395 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRAMEP78395 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.12■□□□□ 0.17
PRAMEP78395 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRAMEP78395 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRAMEP78395 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRAMEP78395 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.12■□□□□ 0.17
PRAMEP78395 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.12■□□□□ 0.17
PRAMEP78395 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.12■□□□□ 0.17
PRAMEP78395 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRAMEP78395 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PRAMEP78395 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
PRAMEP78395 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.12■□□□□ 0.17
PRAMEP78395 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.12■□□□□ 0.17
PRAMEP78395 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
PRAMEP78395 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.12■□□□□ 0.17
PRAMEP78395 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEP78395 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.11■□□□□ 0.17
PRAMEP78395 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
PRAMEP78395 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEP78395 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEP78395 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEP78395 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.11■□□□□ 0.17
PRAMEP78395 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.11■□□□□ 0.17
PRAMEP78395 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEP78395 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEP78395 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEP78395 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEP78395 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEP78395 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEP78395 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEP78395 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEP78395 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEP78395 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PRAMEP78395 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms