Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.1■□□□□ 0.01
GABREP78334 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
GABREP78334 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
GABREP78334 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GABREP78334 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
GABREP78334 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.09■□□□□ 0.01
GABREP78334 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
GABREP78334 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.09■□□□□ 0.01
GABREP78334 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GABREP78334 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GABREP78334 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GABREP78334 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GABREP78334 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
GABREP78334 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
GABREP78334 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GABREP78334 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GABREP78334 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GABREP78334 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GABREP78334 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GABREP78334 C1QBPP1-201ENST00000400117 770 ntBASIC15.09■□□□□ 0.01
GABREP78334 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.09■□□□□ 0.01
GABREP78334 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.09■□□□□ 0.01
GABREP78334 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
GABREP78334 FTH1P14-201ENST00000482930 551 ntBASIC15.09■□□□□ 0.01
GABREP78334 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC15.09■□□□□ 0.01
GABREP78334 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.09■□□□□ 0.01
GABREP78334 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.09■□□□□ 0.01
GABREP78334 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.09■□□□□ 0.01
GABREP78334 AC079316.1-201ENST00000548397 411 ntBASIC15.09■□□□□ 0.01
GABREP78334 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.09■□□□□ 0.01
GABREP78334 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.09■□□□□ 0.01
GABREP78334 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GABREP78334 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.09■□□□□ 0.01
GABREP78334 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC15.09■□□□□ 0.01
GABREP78334 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC15.09■□□□□ 0.01
GABREP78334 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GABREP78334 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.09■□□□□ 0.01
GABREP78334 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
GABREP78334 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GABREP78334 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.09■□□□□ 0.01
GABREP78334 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GABREP78334 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GABREP78334 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GABREP78334 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GABREP78334 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.09■□□□□ 0.01
GABREP78334 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GABREP78334 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.09■□□□□ 0.01
GABREP78334 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.09■□□□□ 0.01
GABREP78334 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0.01
GABREP78334 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
GABREP78334 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.08■□□□□ 0.01
GABREP78334 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
GABREP78334 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
GABREP78334 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
GABREP78334 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.08■□□□□ 0.01
GABREP78334 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
GABREP78334 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.08■□□□□ 0
GABREP78334 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.08■□□□□ 0
GABREP78334 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
GABREP78334 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.08■□□□□ 0
GABREP78334 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC15.08■□□□□ 0
GABREP78334 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
GABREP78334 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC15.08■□□□□ 0
GABREP78334 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.08■□□□□ 0
GABREP78334 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
GABREP78334 GOLGA2P4-201ENST00000441462 777 ntBASIC15.08■□□□□ 0
GABREP78334 TARDBPP1-201ENST00000442013 1203 ntBASIC15.08■□□□□ 0
GABREP78334 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC15.08■□□□□ 0
GABREP78334 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC15.08■□□□□ 0
GABREP78334 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.08■□□□□ 0
GABREP78334 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.08■□□□□ 0
GABREP78334 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.08■□□□□ 0
GABREP78334 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.08■□□□□ 0
GABREP78334 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC15.08■□□□□ 0
GABREP78334 MIR3615-201ENST00000581999 87 ntBASIC15.08■□□□□ 0
GABREP78334 AL049840.4-201ENST00000602422 811 ntBASIC15.08■□□□□ 0
GABREP78334 AC009542.2-202ENST00000619004 1067 ntBASIC15.08■□□□□ 0
GABREP78334 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.08■□□□□ 0
GABREP78334 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.08■□□□□ 0
GABREP78334 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.08■□□□□ 0
GABREP78334 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
GABREP78334 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.08■□□□□ 0
GABREP78334 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
GABREP78334 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.08■□□□□ 0
GABREP78334 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.08■□□□□ 0
GABREP78334 AGGF1P2-201ENST00000426656 2106 ntBASIC15.08■□□□□ 0
GABREP78334 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
GABREP78334 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
GABREP78334 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
GABREP78334 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
GABREP78334 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
GABREP78334 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
GABREP78334 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
GABREP78334 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.08■□□□□ 0
GABREP78334 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.08■□□□□ 0
GABREP78334 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.08■□□□□ 0
GABREP78334 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
GABREP78334 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
GABREP78334 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
GABREP78334 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms