Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.56□□□□□ -0.08
CXCR4P61073 AC093724.1-201ENST00000448659 1027 ntBASIC14.56□□□□□ -0.08
CXCR4P61073 AC136632.2-201ENST00000512891 861 ntBASIC14.56□□□□□ -0.08
CXCR4P61073 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.56□□□□□ -0.08
CXCR4P61073 PRELID1P1-202ENST00000567272 903 ntBASIC14.56□□□□□ -0.08
CXCR4P61073 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.56□□□□□ -0.08
CXCR4P61073 LINC01711-201ENST00000598340 967 ntBASIC14.56□□□□□ -0.08
CXCR4P61073 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CXCR4P61073 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CXCR4P61073 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
CXCR4P61073 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.56□□□□□ -0.08
CXCR4P61073 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.56□□□□□ -0.08
CXCR4P61073 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CXCR4P61073 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.56□□□□□ -0.08
CXCR4P61073 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.56□□□□□ -0.08
CXCR4P61073 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.56□□□□□ -0.08
CXCR4P61073 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
CXCR4P61073 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
CXCR4P61073 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CXCR4P61073 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CXCR4P61073 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.56□□□□□ -0.08
CXCR4P61073 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.56□□□□□ -0.08
CXCR4P61073 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CXCR4P61073 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CXCR4P61073 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.56□□□□□ -0.08
CXCR4P61073 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CXCR4P61073 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CXCR4P61073 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
CXCR4P61073 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CXCR4P61073 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CXCR4P61073 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
CXCR4P61073 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CXCR4P61073 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CXCR4P61073 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CXCR4P61073 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CXCR4P61073 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.55□□□□□ -0.08
CXCR4P61073 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CXCR4P61073 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.55□□□□□ -0.08
CXCR4P61073 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CXCR4P61073 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CXCR4P61073 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.55□□□□□ -0.08
CXCR4P61073 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CXCR4P61073 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.55□□□□□ -0.08
CXCR4P61073 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CXCR4P61073 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.55□□□□□ -0.08
CXCR4P61073 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.55□□□□□ -0.08
CXCR4P61073 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC14.55□□□□□ -0.08
CXCR4P61073 OR7E14P-202ENST00000530490 1290 ntBASIC14.55□□□□□ -0.08
CXCR4P61073 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.55□□□□□ -0.08
CXCR4P61073 PRR29-207ENST00000580752 458 ntTSL 3 BASIC14.55□□□□□ -0.08
CXCR4P61073 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.55□□□□□ -0.08
CXCR4P61073 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CXCR4P61073 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CXCR4P61073 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CXCR4P61073 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.55□□□□□ -0.08
CXCR4P61073 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.55□□□□□ -0.08
CXCR4P61073 AC140479.7-201ENST00000636301 2332 ntBASIC14.55□□□□□ -0.08
CXCR4P61073 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CXCR4P61073 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CXCR4P61073 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CXCR4P61073 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.55□□□□□ -0.08
CXCR4P61073 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.55□□□□□ -0.08
CXCR4P61073 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CXCR4P61073 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CXCR4P61073 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.55□□□□□ -0.08
CXCR4P61073 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CXCR4P61073 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CXCR4P61073 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CXCR4P61073 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CXCR4P61073 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CXCR4P61073 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
CXCR4P61073 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CXCR4P61073 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.55□□□□□ -0.08
CXCR4P61073 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CXCR4P61073 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.54□□□□□ -0.08
CXCR4P61073 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CXCR4P61073 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
CXCR4P61073 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.54□□□□□ -0.08
CXCR4P61073 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.54□□□□□ -0.08
CXCR4P61073 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.54□□□□□ -0.08
CXCR4P61073 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CXCR4P61073 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CXCR4P61073 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CXCR4P61073 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
CXCR4P61073 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.54□□□□□ -0.08
CXCR4P61073 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CXCR4P61073 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CXCR4P61073 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CXCR4P61073 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.54□□□□□ -0.08
CXCR4P61073 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.54□□□□□ -0.08
CXCR4P61073 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CXCR4P61073 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC14.54□□□□□ -0.08
CXCR4P61073 RPS2P1-201ENST00000434010 821 ntBASIC14.54□□□□□ -0.08
CXCR4P61073 DUSP5P1-201ENST00000441325 1139 ntBASIC14.54□□□□□ -0.08
CXCR4P61073 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CXCR4P61073 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.54□□□□□ -0.08
CXCR4P61073 AF238378.1-201ENST00000526806 358 ntBASIC14.54□□□□□ -0.08
CXCR4P61073 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC14.54□□□□□ -0.08
CXCR4P61073 AC008667.4-201ENST00000607370 168 ntBASIC14.54□□□□□ -0.08
CXCR4P61073 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms