Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
HCFC1P51610 AC074338.1-201ENST00000416825 156 ntBASIC13.78□□□□□ -0.2
HCFC1P51610 AC026954.1-201ENST00000429771 1293 ntBASIC13.78□□□□□ -0.2
HCFC1P51610 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.78□□□□□ -0.2
HCFC1P51610 SLED1-202ENST00000512051 380 ntBASIC13.78□□□□□ -0.2
HCFC1P51610 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC13.78□□□□□ -0.2
HCFC1P51610 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.78□□□□□ -0.2
HCFC1P51610 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.78□□□□□ -0.2
HCFC1P51610 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC13.78□□□□□ -0.2
HCFC1P51610 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HCFC1P51610 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC13.77□□□□□ -0.2
HCFC1P51610 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
HCFC1P51610 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
HCFC1P51610 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
HCFC1P51610 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.2
HCFC1P51610 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
HCFC1P51610 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
HCFC1P51610 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
HCFC1P51610 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC13.77□□□□□ -0.2
HCFC1P51610 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
HCFC1P51610 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
HCFC1P51610 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC13.77□□□□□ -0.2
HCFC1P51610 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
HCFC1P51610 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
HCFC1P51610 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HCFC1P51610 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
HCFC1P51610 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC13.77□□□□□ -0.21
HCFC1P51610 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HCFC1P51610 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HCFC1P51610 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
HCFC1P51610 VDAC1P7-201ENST00000462417 847 ntBASIC13.77□□□□□ -0.21
HCFC1P51610 POU5F1P6-201ENST00000466990 990 ntBASIC13.77□□□□□ -0.21
HCFC1P51610 TPI1-206ENST00000488464 791 ntTSL 5 BASIC13.77□□□□□ -0.21
HCFC1P51610 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.77□□□□□ -0.21
HCFC1P51610 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.77□□□□□ -0.21
HCFC1P51610 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
HCFC1P51610 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.77□□□□□ -0.21
HCFC1P51610 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
HCFC1P51610 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
HCFC1P51610 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HCFC1P51610 LINC02199-201ENST00000506655 2702 ntBASIC13.77□□□□□ -0.21
HCFC1P51610 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HCFC1P51610 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.77□□□□□ -0.21
HCFC1P51610 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HCFC1P51610 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
HCFC1P51610 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HCFC1P51610 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
HCFC1P51610 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
HCFC1P51610 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HCFC1P51610 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
HCFC1P51610 AL121723.1-201ENST00000445194 1519 ntBASIC13.77□□□□□ -0.21
HCFC1P51610 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
HCFC1P51610 AC134312.5-201ENST00000568031 1313 ntBASIC13.77□□□□□ -0.21
HCFC1P51610 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.77□□□□□ -0.21
HCFC1P51610 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HCFC1P51610 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HCFC1P51610 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HCFC1P51610 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
HCFC1P51610 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HCFC1P51610 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HCFC1P51610 AGER-203ENST00000375065 665 ntTSL 2 BASIC13.76□□□□□ -0.21
HCFC1P51610 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.76□□□□□ -0.21
HCFC1P51610 RPL13AP20-201ENST00000459725 609 ntBASIC13.76□□□□□ -0.21
HCFC1P51610 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.76□□□□□ -0.21
HCFC1P51610 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.76□□□□□ -0.21
HCFC1P51610 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.76□□□□□ -0.21
HCFC1P51610 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC13.76□□□□□ -0.21
HCFC1P51610 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HCFC1P51610 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC13.76□□□□□ -0.21
HCFC1P51610 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC13.76□□□□□ -0.21
HCFC1P51610 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC13.76□□□□□ -0.21
HCFC1P51610 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC13.76□□□□□ -0.21
HCFC1P51610 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC13.76□□□□□ -0.21
HCFC1P51610 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.76□□□□□ -0.21
HCFC1P51610 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HCFC1P51610 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.76□□□□□ -0.21
HCFC1P51610 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HCFC1P51610 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC13.76□□□□□ -0.21
HCFC1P51610 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC13.76□□□□□ -0.21
HCFC1P51610 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HCFC1P51610 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HCFC1P51610 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HCFC1P51610 REXO1L8P-201ENST00000604378 1897 ntBASIC13.76□□□□□ -0.21
HCFC1P51610 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
HCFC1P51610 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HCFC1P51610 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC13.76□□□□□ -0.21
HCFC1P51610 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
HCFC1P51610 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HCFC1P51610 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
HCFC1P51610 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HCFC1P51610 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HCFC1P51610 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
HCFC1P51610 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HCFC1P51610 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HCFC1P51610 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HCFC1P51610 AC136604.1-201ENST00000418535 575 ntBASIC13.76□□□□□ -0.21
HCFC1P51610 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC13.76□□□□□ -0.21
HCFC1P51610 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HCFC1P51610 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.76□□□□□ -0.21
HCFC1P51610 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms