Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 AC036164.1-201ENST00000570544 333 ntBASIC14.16□□□□□ -0.14
LHX2P50458 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.16□□□□□ -0.14
LHX2P50458 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.16□□□□□ -0.14
LHX2P50458 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.16□□□□□ -0.14
LHX2P50458 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
LHX2P50458 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LHX2P50458 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LHX2P50458 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.16□□□□□ -0.14
LHX2P50458 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
LHX2P50458 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.16□□□□□ -0.14
LHX2P50458 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LHX2P50458 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
LHX2P50458 AC138969.3-201ENST00000546612 1459 ntBASIC14.16□□□□□ -0.14
LHX2P50458 AC138932.2-201ENST00000548268 1459 ntBASIC14.16□□□□□ -0.14
LHX2P50458 AC126755.4-201ENST00000549796 1459 ntBASIC14.16□□□□□ -0.14
LHX2P50458 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
LHX2P50458 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LHX2P50458 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.16□□□□□ -0.14
LHX2P50458 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LHX2P50458 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.16□□□□□ -0.14
LHX2P50458 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LHX2P50458 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LHX2P50458 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
LHX2P50458 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.16□□□□□ -0.14
LHX2P50458 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
LHX2P50458 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LHX2P50458 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LHX2P50458 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LHX2P50458 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LHX2P50458 AL162727.3-201ENST00000635661 2787 ntBASIC14.16□□□□□ -0.14
LHX2P50458 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LHX2P50458 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LHX2P50458 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LHX2P50458 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LHX2P50458 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LHX2P50458 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LHX2P50458 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.15□□□□□ -0.14
LHX2P50458 CICP6-201ENST00000457191 2729 ntBASIC14.15□□□□□ -0.14
LHX2P50458 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LHX2P50458 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
LHX2P50458 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LHX2P50458 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
LHX2P50458 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LHX2P50458 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LHX2P50458 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LHX2P50458 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LHX2P50458 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LHX2P50458 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
LHX2P50458 CLK3P2-201ENST00000427566 1453 ntBASIC14.15□□□□□ -0.14
LHX2P50458 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LHX2P50458 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LHX2P50458 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
LHX2P50458 AC098614.1-201ENST00000368528 745 ntBASIC14.15□□□□□ -0.14
LHX2P50458 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.15□□□□□ -0.14
LHX2P50458 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LHX2P50458 COX5BP8-201ENST00000416911 349 ntBASIC14.15□□□□□ -0.14
LHX2P50458 AC005034.1-201ENST00000426657 489 ntBASIC14.15□□□□□ -0.14
LHX2P50458 GAPDHP21-201ENST00000450301 1010 ntBASIC14.15□□□□□ -0.14
LHX2P50458 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.15□□□□□ -0.14
LHX2P50458 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.15□□□□□ -0.14
LHX2P50458 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.15□□□□□ -0.14
LHX2P50458 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.15□□□□□ -0.14
LHX2P50458 MIR8072-201ENST00000614241 80 ntBASIC14.15□□□□□ -0.14
LHX2P50458 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
LHX2P50458 AL035252.4-201ENST00000624174 288 ntBASIC14.15□□□□□ -0.14
LHX2P50458 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.15□□□□□ -0.14
LHX2P50458 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LHX2P50458 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
LHX2P50458 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.15□□□□□ -0.14
LHX2P50458 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LHX2P50458 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LHX2P50458 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LHX2P50458 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LHX2P50458 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LHX2P50458 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
LHX2P50458 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LHX2P50458 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LHX2P50458 AC010491.1-201ENST00000563101 2797 ntBASIC14.15□□□□□ -0.14
LHX2P50458 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LHX2P50458 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LHX2P50458 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
LHX2P50458 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LHX2P50458 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LHX2P50458 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC14.14□□□□□ -0.15
LHX2P50458 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.14□□□□□ -0.15
LHX2P50458 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
LHX2P50458 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
LHX2P50458 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
LHX2P50458 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
LHX2P50458 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
LHX2P50458 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LHX2P50458 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
LHX2P50458 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LHX2P50458 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LHX2P50458 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LHX2P50458 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.14□□□□□ -0.15
LHX2P50458 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.14□□□□□ -0.15
LHX2P50458 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
LHX2P50458 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.14□□□□□ -0.15
LHX2P50458 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms