Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
CASP4P49662 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
CASP4P49662 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CASP4P49662 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.34■□□□□ 0.37
CASP4P49662 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CASP4P49662 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CASP4P49662 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CASP4P49662 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CASP4P49662 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CASP4P49662 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.34■□□□□ 0.37
CASP4P49662 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CASP4P49662 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.34■□□□□ 0.37
CASP4P49662 TREML5P-201ENST00000421694 576 ntBASIC17.34■□□□□ 0.37
CASP4P49662 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CASP4P49662 FAM86GP-201ENST00000448322 971 ntBASIC17.34■□□□□ 0.37
CASP4P49662 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.34■□□□□ 0.37
CASP4P49662 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.34■□□□□ 0.37
CASP4P49662 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CASP4P49662 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
CASP4P49662 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.34■□□□□ 0.37
CASP4P49662 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
CASP4P49662 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CASP4P49662 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CASP4P49662 AL138828.2-201ENST00000615812 383 ntBASIC17.34■□□□□ 0.37
CASP4P49662 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.34■□□□□ 0.37
CASP4P49662 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.34■□□□□ 0.37
CASP4P49662 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CASP4P49662 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CASP4P49662 AC144831.1-201ENST00000573312 2656 ntBASIC17.34■□□□□ 0.37
CASP4P49662 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CASP4P49662 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC17.33■□□□□ 0.37
CASP4P49662 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.33■□□□□ 0.37
CASP4P49662 CETN4P-206ENST00000642099 2168 ntBASIC17.33■□□□□ 0.37
CASP4P49662 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.33■□□□□ 0.37
CASP4P49662 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CASP4P49662 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CASP4P49662 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC17.33■□□□□ 0.37
CASP4P49662 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CASP4P49662 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CASP4P49662 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.33■□□□□ 0.37
CASP4P49662 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CASP4P49662 FO538757.1-201ENST00000623083 1397 ntBASIC17.33■□□□□ 0.36
CASP4P49662 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CASP4P49662 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CASP4P49662 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CASP4P49662 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CASP4P49662 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CASP4P49662 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.33■□□□□ 0.36
CASP4P49662 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CASP4P49662 AC107890.1-201ENST00000422478 521 ntBASIC17.33■□□□□ 0.36
CASP4P49662 AC092580.3-201ENST00000430932 139 ntBASIC17.33■□□□□ 0.36
CASP4P49662 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
CASP4P49662 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.33■□□□□ 0.36
CASP4P49662 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.33■□□□□ 0.36
CASP4P49662 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC17.33■□□□□ 0.36
CASP4P49662 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CASP4P49662 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CASP4P49662 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CASP4P49662 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CASP4P49662 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CASP4P49662 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.33■□□□□ 0.36
CASP4P49662 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CASP4P49662 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CASP4P49662 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CASP4P49662 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
CASP4P49662 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.32■□□□□ 0.36
CASP4P49662 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CASP4P49662 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.32■□□□□ 0.36
CASP4P49662 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.32■□□□□ 0.36
CASP4P49662 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CASP4P49662 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CASP4P49662 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.32■□□□□ 0.36
CASP4P49662 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CASP4P49662 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CASP4P49662 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CASP4P49662 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.32■□□□□ 0.36
CASP4P49662 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.32■□□□□ 0.36
CASP4P49662 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CASP4P49662 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CASP4P49662 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CASP4P49662 FO393414.2-201ENST00000405153 598 ntBASIC17.32■□□□□ 0.36
CASP4P49662 AC136604.1-201ENST00000418535 575 ntBASIC17.32■□□□□ 0.36
CASP4P49662 PMS2P2-201ENST00000425039 1128 ntBASIC17.32■□□□□ 0.36
CASP4P49662 AL645939.2-201ENST00000427340 991 ntBASIC17.32■□□□□ 0.36
CASP4P49662 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.32■□□□□ 0.36
CASP4P49662 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.32■□□□□ 0.36
CASP4P49662 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.32■□□□□ 0.36
CASP4P49662 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.32■□□□□ 0.36
CASP4P49662 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.32■□□□□ 0.36
CASP4P49662 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
CASP4P49662 AC093512.1-201ENST00000617969 520 ntBASIC17.32■□□□□ 0.36
CASP4P49662 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CASP4P49662 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CASP4P49662 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CASP4P49662 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC17.32■□□□□ 0.36
CASP4P49662 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CASP4P49662 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CASP4P49662 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CASP4P49662 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.32■□□□□ 0.36
CASP4P49662 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms