Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 AC022748.3-201ENST00000621828 275 ntBASIC17.61■□□□□ 0.41
CENPFP49454 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.61■□□□□ 0.41
CENPFP49454 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CENPFP49454 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CENPFP49454 TUBBP5-203ENST00000508529 1334 ntBASIC17.61■□□□□ 0.41
CENPFP49454 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC17.61■□□□□ 0.41
CENPFP49454 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC17.61■□□□□ 0.41
CENPFP49454 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CENPFP49454 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC17.6■□□□□ 0.41
CENPFP49454 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC17.6■□□□□ 0.41
CENPFP49454 GGT3P-204ENST00000453783 1664 ntBASIC17.6■□□□□ 0.41
CENPFP49454 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CENPFP49454 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CENPFP49454 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CENPFP49454 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC17.6■□□□□ 0.41
CENPFP49454 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CENPFP49454 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CENPFP49454 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CENPFP49454 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CENPFP49454 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC17.6■□□□□ 0.41
CENPFP49454 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC17.6■□□□□ 0.41
CENPFP49454 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
CENPFP49454 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC17.6■□□□□ 0.41
CENPFP49454 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC17.6■□□□□ 0.41
CENPFP49454 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.6■□□□□ 0.41
CENPFP49454 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CENPFP49454 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CENPFP49454 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.6■□□□□ 0.41
CENPFP49454 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.6■□□□□ 0.41
CENPFP49454 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.6■□□□□ 0.41
CENPFP49454 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CENPFP49454 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CENPFP49454 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CENPFP49454 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.6■□□□□ 0.41
CENPFP49454 AL691432.1-201ENST00000596308 1422 ntBASIC17.6■□□□□ 0.41
CENPFP49454 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.6■□□□□ 0.41
CENPFP49454 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CENPFP49454 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CENPFP49454 NCK2-206ENST00000522586 490 ntTSL 5 BASIC17.6■□□□□ 0.41
CENPFP49454 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CENPFP49454 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CENPFP49454 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.6■□□□□ 0.41
CENPFP49454 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CENPFP49454 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CENPFP49454 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CENPFP49454 MIR1227-201ENST00000408484 88 ntBASIC17.59■□□□□ 0.41
CENPFP49454 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC17.59■□□□□ 0.41
CENPFP49454 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CENPFP49454 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.59■□□□□ 0.41
CENPFP49454 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CENPFP49454 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CENPFP49454 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CENPFP49454 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.59■□□□□ 0.41
CENPFP49454 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CENPFP49454 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CENPFP49454 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.59■□□□□ 0.41
CENPFP49454 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC17.59■□□□□ 0.41
CENPFP49454 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
CENPFP49454 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CENPFP49454 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CENPFP49454 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CENPFP49454 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CENPFP49454 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CENPFP49454 RN7SL8P-201ENST00000461771 266 ntBASIC17.59■□□□□ 0.41
CENPFP49454 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
CENPFP49454 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CENPFP49454 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC17.59■□□□□ 0.41
CENPFP49454 AC005357.2-202ENST00000590507 1060 ntBASIC17.59■□□□□ 0.41
CENPFP49454 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CENPFP49454 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CENPFP49454 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
CENPFP49454 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CENPFP49454 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.59■□□□□ 0.41
CENPFP49454 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CENPFP49454 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC17.59■□□□□ 0.41
CENPFP49454 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
CENPFP49454 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.59■□□□□ 0.41
CENPFP49454 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC17.59■□□□□ 0.41
CENPFP49454 AP003171.2-201ENST00000528208 925 ntBASIC17.59■□□□□ 0.41
CENPFP49454 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CENPFP49454 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.59■□□□□ 0.41
CENPFP49454 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CENPFP49454 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CENPFP49454 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC17.58■□□□□ 0.41
CENPFP49454 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.58■□□□□ 0.41
CENPFP49454 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CENPFP49454 KRT8P35-201ENST00000483942 1338 ntBASIC17.58■□□□□ 0.41
CENPFP49454 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CENPFP49454 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CENPFP49454 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CENPFP49454 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.58■□□□□ 0.41
CENPFP49454 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.58■□□□□ 0.41
CENPFP49454 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CENPFP49454 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CENPFP49454 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
CENPFP49454 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CENPFP49454 RN7SL818P-201ENST00000485099 259 ntBASIC17.58■□□□□ 0.41
CENPFP49454 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CENPFP49454 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC17.58■□□□□ 0.41
CENPFP49454 GMFG-209ENST00000600322 622 ntTSL 5 BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms