Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC1A6P48664 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC1A6P48664 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SLC1A6P48664 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SLC1A6P48664 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC1A6P48664 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SLC1A6P48664 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SLC1A6P48664 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
SLC1A6P48664 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SLC1A6P48664 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SLC1A6P48664 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SLC1A6P48664 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SLC1A6P48664 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
SLC1A6P48664 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC1A6P48664 PCDHA3-202ENST00000532566 4594 ntBASIC15.7■□□□□ 0.1
SLC1A6P48664 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SLC1A6P48664 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SLC1A6P48664 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.7■□□□□ 0.1
SLC1A6P48664 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC1A6P48664 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC1A6P48664 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC1A6P48664 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC1A6P48664 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SLC1A6P48664 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.7■□□□□ 0.1
SLC1A6P48664 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
SLC1A6P48664 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SLC1A6P48664 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC1A6P48664 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC1A6P48664 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.7■□□□□ 0.1
SLC1A6P48664 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.7■□□□□ 0.1
SLC1A6P48664 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC1A6P48664 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SLC1A6P48664 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
SLC1A6P48664 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SLC1A6P48664 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SLC1A6P48664 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC1A6P48664 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC1A6P48664 AC018712.1-201ENST00000455767 687 ntBASIC15.7■□□□□ 0.1
SLC1A6P48664 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC1A6P48664 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC15.7■□□□□ 0.1
SLC1A6P48664 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC1A6P48664 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SLC1A6P48664 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SLC1A6P48664 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC15.7■□□□□ 0.1
SLC1A6P48664 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.7■□□□□ 0.1
SLC1A6P48664 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
SLC1A6P48664 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC1A6P48664 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.7■□□□□ 0.1
SLC1A6P48664 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SLC1A6P48664 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.7■□□□□ 0.1
SLC1A6P48664 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.7■□□□□ 0.1
SLC1A6P48664 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.7■□□□□ 0.1
SLC1A6P48664 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.7■□□□□ 0.1
SLC1A6P48664 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.7■□□□□ 0.1
SLC1A6P48664 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.69■□□□□ 0.1
SLC1A6P48664 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.69■□□□□ 0.1
SLC1A6P48664 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
SLC1A6P48664 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
SLC1A6P48664 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.69■□□□□ 0.1
SLC1A6P48664 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A6P48664 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.69■□□□□ 0.1
SLC1A6P48664 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A6P48664 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A6P48664 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A6P48664 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A6P48664 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A6P48664 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A6P48664 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A6P48664 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A6P48664 AC127383.1-201ENST00000444697 1800 ntBASIC15.69■□□□□ 0.1
SLC1A6P48664 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
SLC1A6P48664 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.69■□□□□ 0.1
SLC1A6P48664 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A6P48664 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SLC1A6P48664 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A6P48664 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.69■□□□□ 0.1
SLC1A6P48664 RPS2P28-201ENST00000314255 741 ntBASIC15.69■□□□□ 0.1
SLC1A6P48664 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
SLC1A6P48664 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.69■□□□□ 0.1
SLC1A6P48664 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.69■□□□□ 0.1
SLC1A6P48664 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SLC1A6P48664 FAM197Y8-203ENST00000450145 560 ntBASIC15.69■□□□□ 0.1
SLC1A6P48664 AC108751.1-201ENST00000490852 363 ntBASIC15.69■□□□□ 0.1
SLC1A6P48664 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A6P48664 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.69■□□□□ 0.1
SLC1A6P48664 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.69■□□□□ 0.1
SLC1A6P48664 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.69■□□□□ 0.1
SLC1A6P48664 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.69■□□□□ 0.1
SLC1A6P48664 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.69■□□□□ 0.1
SLC1A6P48664 MIR4313-201ENST00000580760 101 ntBASIC15.69■□□□□ 0.1
SLC1A6P48664 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.69■□□□□ 0.1
SLC1A6P48664 AL445228.2-201ENST00000605589 952 ntBASIC15.69■□□□□ 0.1
SLC1A6P48664 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.69■□□□□ 0.1
SLC1A6P48664 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A6P48664 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A6P48664 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SLC1A6P48664 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A6P48664 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SLC1A6P48664 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.69■□□□□ 0.1
SLC1A6P48664 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms