Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-1P43699 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-1P43699 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-1P43699 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC13.11□□□□□ -0.31
NKX2-1P43699 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.11□□□□□ -0.31
NKX2-1P43699 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
NKX2-1P43699 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
NKX2-1P43699 LINC00528-201ENST00000600723 2160 ntBASIC13.11□□□□□ -0.31
NKX2-1P43699 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.11□□□□□ -0.31
NKX2-1P43699 AC232323.1-201ENST00000540724 2099 ntBASIC13.11□□□□□ -0.31
NKX2-1P43699 REXO1L5P-201ENST00000622260 2098 ntBASIC13.11□□□□□ -0.31
NKX2-1P43699 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-1P43699 GRK6P1-201ENST00000400595 1711 ntBASIC13.11□□□□□ -0.31
NKX2-1P43699 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-1P43699 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.11□□□□□ -0.31
NKX2-1P43699 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.11□□□□□ -0.31
NKX2-1P43699 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-1P43699 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-1P43699 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-1P43699 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-1P43699 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
NKX2-1P43699 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-1P43699 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
NKX2-1P43699 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
NKX2-1P43699 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-1P43699 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.11□□□□□ -0.31
NKX2-1P43699 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
NKX2-1P43699 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-1P43699 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-1P43699 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.11□□□□□ -0.31
NKX2-1P43699 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.11□□□□□ -0.31
NKX2-1P43699 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC13.11□□□□□ -0.31
NKX2-1P43699 AC132008.2-207ENST00000454517 770 ntBASIC13.11□□□□□ -0.31
NKX2-1P43699 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC13.11□□□□□ -0.31
NKX2-1P43699 AC106795.1-205ENST00000512851 1056 ntBASIC13.11□□□□□ -0.31
NKX2-1P43699 MSRA-206ENST00000521209 814 ntTSL 3 BASIC13.11□□□□□ -0.31
NKX2-1P43699 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-1P43699 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC13.11□□□□□ -0.31
NKX2-1P43699 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-1P43699 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC13.11□□□□□ -0.31
NKX2-1P43699 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC13.11□□□□□ -0.31
NKX2-1P43699 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC13.11□□□□□ -0.31
NKX2-1P43699 AC021097.1-201ENST00000607902 574 ntBASIC13.11□□□□□ -0.31
NKX2-1P43699 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
NKX2-1P43699 BCL10-202ENST00000620248 774 ntTSL 5 BASIC13.11□□□□□ -0.31
NKX2-1P43699 AC012569.1-201ENST00000591191 1524 ntBASIC13.11□□□□□ -0.31
NKX2-1P43699 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-1P43699 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-1P43699 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-1P43699 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
NKX2-1P43699 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-1P43699 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-1P43699 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-1P43699 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
NKX2-1P43699 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
NKX2-1P43699 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-1P43699 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-1P43699 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-1P43699 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-1P43699 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-1P43699 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.11□□□□□ -0.31
NKX2-1P43699 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-1P43699 AL359258.3-201ENST00000622910 2331 ntBASIC13.11□□□□□ -0.31
NKX2-1P43699 AGAP7P-201ENST00000582299 2062 ntBASIC13.11□□□□□ -0.31
NKX2-1P43699 AGAP14-201ENST00000624701 2060 ntBASIC13.11□□□□□ -0.31
NKX2-1P43699 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-1P43699 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-1P43699 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-1P43699 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-1P43699 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
NKX2-1P43699 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.1□□□□□ -0.31
NKX2-1P43699 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.1□□□□□ -0.31
NKX2-1P43699 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-1P43699 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-1P43699 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-1P43699 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.1□□□□□ -0.31
NKX2-1P43699 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-1P43699 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-1P43699 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-1P43699 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
NKX2-1P43699 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-1P43699 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-1P43699 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.1□□□□□ -0.31
NKX2-1P43699 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.1□□□□□ -0.31
NKX2-1P43699 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-1P43699 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-1P43699 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-1P43699 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.1□□□□□ -0.31
NKX2-1P43699 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-1P43699 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-1P43699 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-1P43699 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
NKX2-1P43699 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC13.1□□□□□ -0.31
NKX2-1P43699 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC13.1□□□□□ -0.31
NKX2-1P43699 MPI-205ENST00000562606 1052 ntTSL 3 BASIC13.1□□□□□ -0.31
NKX2-1P43699 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.1□□□□□ -0.31
NKX2-1P43699 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-1P43699 METTL23-204ENST00000586752 904 ntTSL 2 BASIC13.1□□□□□ -0.31
NKX2-1P43699 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-1P43699 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms