Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT9P35527 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT9P35527 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
KRT9P35527 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
KRT9P35527 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT9P35527 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC17.47■□□□□ 0.39
KRT9P35527 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT9P35527 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.47■□□□□ 0.39
KRT9P35527 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
KRT9P35527 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.47■□□□□ 0.39
KRT9P35527 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.47■□□□□ 0.39
KRT9P35527 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
KRT9P35527 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.47■□□□□ 0.39
KRT9P35527 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.47■□□□□ 0.39
KRT9P35527 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.47■□□□□ 0.39
KRT9P35527 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT9P35527 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT9P35527 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT9P35527 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
KRT9P35527 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.47■□□□□ 0.39
KRT9P35527 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC17.47■□□□□ 0.39
KRT9P35527 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT9P35527 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT9P35527 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT9P35527 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT9P35527 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
KRT9P35527 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
KRT9P35527 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.47■□□□□ 0.39
KRT9P35527 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT9P35527 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
KRT9P35527 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC17.46■□□□□ 0.39
KRT9P35527 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KRT9P35527 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
KRT9P35527 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
KRT9P35527 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.46■□□□□ 0.39
KRT9P35527 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC17.46■□□□□ 0.39
KRT9P35527 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
KRT9P35527 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
KRT9P35527 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC17.46■□□□□ 0.39
KRT9P35527 MECR-202ENST00000373791 2416 ntTSL 2 BASIC17.46■□□□□ 0.39
KRT9P35527 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
KRT9P35527 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
KRT9P35527 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
KRT9P35527 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
KRT9P35527 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
KRT9P35527 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.46■□□□□ 0.39
KRT9P35527 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.46■□□□□ 0.39
KRT9P35527 GPX1P2-201ENST00000429271 606 ntBASIC17.46■□□□□ 0.39
KRT9P35527 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.46■□□□□ 0.39
KRT9P35527 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.46■□□□□ 0.39
KRT9P35527 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
KRT9P35527 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.46■□□□□ 0.39
KRT9P35527 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.46■□□□□ 0.39
KRT9P35527 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KRT9P35527 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
KRT9P35527 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
KRT9P35527 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
KRT9P35527 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC17.46■□□□□ 0.39
KRT9P35527 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC17.46■□□□□ 0.39
KRT9P35527 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
KRT9P35527 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
KRT9P35527 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KRT9P35527 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC17.46■□□□□ 0.39
KRT9P35527 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KRT9P35527 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KRT9P35527 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KRT9P35527 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
KRT9P35527 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
KRT9P35527 PMS2P7-201ENST00000506558 1336 ntBASIC17.46■□□□□ 0.38
KRT9P35527 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT9P35527 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.45■□□□□ 0.38
KRT9P35527 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KRT9P35527 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT9P35527 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT9P35527 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC17.45■□□□□ 0.38
KRT9P35527 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT9P35527 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT9P35527 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
KRT9P35527 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC17.45■□□□□ 0.38
KRT9P35527 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KRT9P35527 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
KRT9P35527 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KRT9P35527 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
KRT9P35527 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC17.45■□□□□ 0.38
KRT9P35527 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT9P35527 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT9P35527 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT9P35527 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KRT9P35527 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.45■□□□□ 0.38
KRT9P35527 PGAM5P1-201ENST00000518923 814 ntBASIC17.45■□□□□ 0.38
KRT9P35527 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KRT9P35527 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT9P35527 AC091812.2-201ENST00000619081 385 ntBASIC17.45■□□□□ 0.38
KRT9P35527 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.45■□□□□ 0.38
KRT9P35527 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC17.45■□□□□ 0.38
KRT9P35527 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC17.45■□□□□ 0.38
KRT9P35527 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT9P35527 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT9P35527 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT9P35527 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms