Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RORAP35398 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RORAP35398 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.14■□□□□ 0.01
RORAP35398 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.14■□□□□ 0.01
RORAP35398 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RORAP35398 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RORAP35398 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RORAP35398 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RORAP35398 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.14■□□□□ 0.01
RORAP35398 AC098614.1-201ENST00000368528 745 ntBASIC15.14■□□□□ 0.01
RORAP35398 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RORAP35398 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.14■□□□□ 0.01
RORAP35398 DGCR5-201ENST00000399539 862 ntBASIC15.14■□□□□ 0.01
RORAP35398 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RORAP35398 MEP1AP4-201ENST00000423244 1087 ntBASIC15.14■□□□□ 0.01
RORAP35398 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.14■□□□□ 0.01
RORAP35398 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RORAP35398 TPRX2P-201ENST00000535362 881 ntBASIC15.14■□□□□ 0.01
RORAP35398 AC023310.3-201ENST00000557027 670 ntBASIC15.14■□□□□ 0.01
RORAP35398 AC243562.2-201ENST00000561247 970 ntBASIC15.14■□□□□ 0.01
RORAP35398 AC100756.1-201ENST00000562736 682 ntBASIC15.14■□□□□ 0.01
RORAP35398 AC138749.3-201ENST00000567691 622 ntBASIC15.14■□□□□ 0.01
RORAP35398 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.14■□□□□ 0.01
RORAP35398 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.14■□□□□ 0.01
RORAP35398 AC099568.2-201ENST00000609194 695 ntBASIC15.14■□□□□ 0.01
RORAP35398 AC116165.1-201ENST00000611806 668 ntBASIC15.14■□□□□ 0.01
RORAP35398 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
RORAP35398 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RORAP35398 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.14■□□□□ 0.01
RORAP35398 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RORAP35398 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.14■□□□□ 0.01
RORAP35398 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RORAP35398 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RORAP35398 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.14■□□□□ 0.01
RORAP35398 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RORAP35398 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
RORAP35398 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RORAP35398 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
RORAP35398 MTHFR-217ENST00000641820 1569 ntBASIC15.14■□□□□ 0.01
RORAP35398 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.14■□□□□ 0.01
RORAP35398 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
RORAP35398 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.14■□□□□ 0.01
RORAP35398 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RORAP35398 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.14■□□□□ 0.01
RORAP35398 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RORAP35398 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.14■□□□□ 0.01
RORAP35398 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
RORAP35398 AC138969.3-201ENST00000546612 1459 ntBASIC15.14■□□□□ 0.01
RORAP35398 AC138932.2-201ENST00000548268 1459 ntBASIC15.14■□□□□ 0.01
RORAP35398 AC126755.4-201ENST00000549796 1459 ntBASIC15.14■□□□□ 0.01
RORAP35398 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RORAP35398 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.13■□□□□ 0.01
RORAP35398 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RORAP35398 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.13■□□□□ 0.01
RORAP35398 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
RORAP35398 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.13■□□□□ 0.01
RORAP35398 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RORAP35398 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RORAP35398 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.13■□□□□ 0.01
RORAP35398 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RORAP35398 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RORAP35398 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RORAP35398 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RORAP35398 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RORAP35398 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RORAP35398 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RORAP35398 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.13■□□□□ 0.01
RORAP35398 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
RORAP35398 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RORAP35398 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
RORAP35398 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.13■□□□□ 0.01
RORAP35398 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RORAP35398 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RORAP35398 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RORAP35398 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.13■□□□□ 0.01
RORAP35398 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.13■□□□□ 0.01
RORAP35398 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.13■□□□□ 0.01
RORAP35398 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.13■□□□□ 0.01
RORAP35398 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.13■□□□□ 0.01
RORAP35398 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.13■□□□□ 0.01
RORAP35398 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RORAP35398 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.13■□□□□ 0.01
RORAP35398 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.13■□□□□ 0.01
RORAP35398 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.13■□□□□ 0.01
RORAP35398 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.13■□□□□ 0.01
RORAP35398 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
RORAP35398 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
RORAP35398 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RORAP35398 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
RORAP35398 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.13■□□□□ 0.01
RORAP35398 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
RORAP35398 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RORAP35398 Z97205.2-201ENST00000564697 1639 ntBASIC15.13■□□□□ 0.01
RORAP35398 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
RORAP35398 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RORAP35398 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RORAP35398 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RORAP35398 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RORAP35398 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RORAP35398 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms