Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
CKS2P33552 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CKS2P33552 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
CKS2P33552 BANP-203ENST00000393207 2438 ntTSL 2 BASIC11.78□□□□□ -0.52
CKS2P33552 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CKS2P33552 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CKS2P33552 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC11.78□□□□□ -0.52
CKS2P33552 AL353732.1-201ENST00000569618 1459 ntBASIC11.78□□□□□ -0.52
CKS2P33552 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
CKS2P33552 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CKS2P33552 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CKS2P33552 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
CKS2P33552 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
CKS2P33552 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CKS2P33552 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CKS2P33552 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CKS2P33552 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC11.78□□□□□ -0.52
CKS2P33552 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CKS2P33552 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
CKS2P33552 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CKS2P33552 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
CKS2P33552 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CKS2P33552 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CKS2P33552 DPM2-202ENST00000373110 738 ntTSL 2 BASIC11.78□□□□□ -0.52
CKS2P33552 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CKS2P33552 AC117947.1-201ENST00000427448 529 ntBASIC11.78□□□□□ -0.52
CKS2P33552 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC11.78□□□□□ -0.52
CKS2P33552 PMS2P1-201ENST00000431037 1228 ntBASIC11.78□□□□□ -0.52
CKS2P33552 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CKS2P33552 AC096582.2-201ENST00000510860 516 ntBASIC11.78□□□□□ -0.52
CKS2P33552 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CKS2P33552 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC11.78□□□□□ -0.52
CKS2P33552 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC11.78□□□□□ -0.52
CKS2P33552 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC11.78□□□□□ -0.52
CKS2P33552 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CKS2P33552 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC11.78□□□□□ -0.52
CKS2P33552 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC11.78□□□□□ -0.52
CKS2P33552 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
CKS2P33552 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
CKS2P33552 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
CKS2P33552 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC11.78□□□□□ -0.52
CKS2P33552 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
CKS2P33552 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC11.78□□□□□ -0.52
CKS2P33552 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
CKS2P33552 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CKS2P33552 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CKS2P33552 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CKS2P33552 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CKS2P33552 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
CKS2P33552 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
CKS2P33552 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CKS2P33552 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
CKS2P33552 NCF1C-201ENST00000438382 1427 ntBASIC11.77□□□□□ -0.52
CKS2P33552 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
CKS2P33552 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CKS2P33552 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CKS2P33552 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
CKS2P33552 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
CKS2P33552 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CKS2P33552 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
CKS2P33552 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC11.77□□□□□ -0.52
CKS2P33552 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
CKS2P33552 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
CKS2P33552 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CKS2P33552 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CKS2P33552 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
CKS2P33552 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC11.77□□□□□ -0.52
CKS2P33552 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.52
CKS2P33552 CELP-203ENST00000624767 2414 ntTSL 5 BASIC11.77□□□□□ -0.52
CKS2P33552 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC11.77□□□□□ -0.52
CKS2P33552 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
CKS2P33552 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CKS2P33552 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
CKS2P33552 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC11.77□□□□□ -0.53
CKS2P33552 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC11.77□□□□□ -0.53
CKS2P33552 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CKS2P33552 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC11.77□□□□□ -0.53
CKS2P33552 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
CKS2P33552 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
CKS2P33552 AC092127.1-201ENST00000567093 3455 ntBASIC11.77□□□□□ -0.53
CKS2P33552 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
CKS2P33552 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CKS2P33552 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CKS2P33552 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CKS2P33552 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CKS2P33552 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CKS2P33552 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CKS2P33552 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CKS2P33552 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CKS2P33552 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC11.77□□□□□ -0.53
CKS2P33552 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC11.77□□□□□ -0.53
CKS2P33552 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC11.77□□□□□ -0.53
CKS2P33552 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC11.77□□□□□ -0.53
CKS2P33552 AC091607.1-201ENST00000490318 1060 ntBASIC11.77□□□□□ -0.53
CKS2P33552 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC11.77□□□□□ -0.53
CKS2P33552 KRT8P26-201ENST00000534154 1276 ntBASIC11.77□□□□□ -0.53
CKS2P33552 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC11.77□□□□□ -0.53
CKS2P33552 AC011498.5-201ENST00000592027 486 ntBASIC11.77□□□□□ -0.53
CKS2P33552 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CKS2P33552 REXO1L3P-201ENST00000622202 1288 ntBASIC11.77□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms