Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HOXC12P31275 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
HOXC12P31275 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
HOXC12P31275 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HOXC12P31275 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
HOXC12P31275 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
HOXC12P31275 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
HOXC12P31275 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HOXC12P31275 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HOXC12P31275 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HOXC12P31275 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
HOXC12P31275 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HOXC12P31275 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HOXC12P31275 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HOXC12P31275 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HOXC12P31275 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC14.17□□□□□ -0.14
HOXC12P31275 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HOXC12P31275 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
HOXC12P31275 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HOXC12P31275 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HOXC12P31275 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
HOXC12P31275 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
HOXC12P31275 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
HOXC12P31275 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
HOXC12P31275 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
HOXC12P31275 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HOXC12P31275 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HOXC12P31275 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HOXC12P31275 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HOXC12P31275 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.17□□□□□ -0.14
HOXC12P31275 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.17□□□□□ -0.14
HOXC12P31275 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
HOXC12P31275 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HOXC12P31275 SERBP1P3-201ENST00000459980 809 ntBASIC14.17□□□□□ -0.14
HOXC12P31275 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.17□□□□□ -0.14
HOXC12P31275 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HOXC12P31275 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.17□□□□□ -0.14
HOXC12P31275 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
HOXC12P31275 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.17□□□□□ -0.14
HOXC12P31275 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HOXC12P31275 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
HOXC12P31275 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HOXC12P31275 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.17□□□□□ -0.14
HOXC12P31275 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HOXC12P31275 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
HOXC12P31275 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HOXC12P31275 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HOXC12P31275 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
HOXC12P31275 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC14.17□□□□□ -0.14
HOXC12P31275 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HOXC12P31275 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
HOXC12P31275 AC006449.6-201ENST00000612330 2296 ntBASIC14.17□□□□□ -0.14
HOXC12P31275 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HOXC12P31275 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
HOXC12P31275 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
HOXC12P31275 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HOXC12P31275 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.17□□□□□ -0.14
HOXC12P31275 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HOXC12P31275 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
HOXC12P31275 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HOXC12P31275 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HOXC12P31275 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.17□□□□□ -0.14
HOXC12P31275 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC14.16□□□□□ -0.14
HOXC12P31275 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HOXC12P31275 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HOXC12P31275 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
HOXC12P31275 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.16□□□□□ -0.14
HOXC12P31275 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.16□□□□□ -0.14
HOXC12P31275 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HOXC12P31275 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.16□□□□□ -0.14
HOXC12P31275 AC009053.2-201ENST00000563701 2365 ntBASIC14.16□□□□□ -0.14
HOXC12P31275 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
HOXC12P31275 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.16□□□□□ -0.14
HOXC12P31275 AC046158.3-201ENST00000624947 2558 ntBASIC14.16□□□□□ -0.14
HOXC12P31275 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.16□□□□□ -0.14
HOXC12P31275 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.16□□□□□ -0.14
HOXC12P31275 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
HOXC12P31275 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HOXC12P31275 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.16□□□□□ -0.14
HOXC12P31275 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
HOXC12P31275 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HOXC12P31275 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.16□□□□□ -0.14
HOXC12P31275 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HOXC12P31275 GPR53P-205ENST00000457298 1084 ntBASIC14.16□□□□□ -0.14
HOXC12P31275 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.16□□□□□ -0.14
HOXC12P31275 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
HOXC12P31275 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.16□□□□□ -0.14
HOXC12P31275 RN7SL828P-201ENST00000607615 303 ntBASIC14.16□□□□□ -0.14
HOXC12P31275 MIR6799-201ENST00000620297 69 ntBASIC14.16□□□□□ -0.14
HOXC12P31275 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.16□□□□□ -0.14
HOXC12P31275 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.16□□□□□ -0.14
HOXC12P31275 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HOXC12P31275 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.16□□□□□ -0.14
HOXC12P31275 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HOXC12P31275 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
HOXC12P31275 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HOXC12P31275 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HOXC12P31275 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.16□□□□□ -0.14
HOXC12P31275 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.16□□□□□ -0.14
HOXC12P31275 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms