Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC19.16■□□□□ 0.66
CHMLP26374 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC19.16■□□□□ 0.66
CHMLP26374 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
CHMLP26374 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHMLP26374 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CHMLP26374 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHMLP26374 C18orf15-201ENST00000623680 2534 ntBASIC19.16■□□□□ 0.66
CHMLP26374 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMLP26374 AC011270.2-201ENST00000624293 2550 ntBASIC19.16■□□□□ 0.66
CHMLP26374 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMLP26374 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC19.15■□□□□ 0.66
CHMLP26374 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMLP26374 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC19.15■□□□□ 0.66
CHMLP26374 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
CHMLP26374 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHMLP26374 GRN-214ENST00000589265 1632 ntTSL 5 BASIC19.15■□□□□ 0.66
CHMLP26374 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHMLP26374 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMLP26374 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
CHMLP26374 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMLP26374 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
CHMLP26374 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMLP26374 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CHMLP26374 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC19.15■□□□□ 0.66
CHMLP26374 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC19.15■□□□□ 0.66
CHMLP26374 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHMLP26374 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHMLP26374 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CHMLP26374 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC19.15■□□□□ 0.66
CHMLP26374 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC19.15■□□□□ 0.66
CHMLP26374 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC19.15■□□□□ 0.66
CHMLP26374 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC19.15■□□□□ 0.66
CHMLP26374 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMLP26374 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMLP26374 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC19.15■□□□□ 0.66
CHMLP26374 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CHMLP26374 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMLP26374 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHMLP26374 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
CHMLP26374 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHMLP26374 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC19.15■□□□□ 0.66
CHMLP26374 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMLP26374 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CHMLP26374 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC19.14■□□□□ 0.66
CHMLP26374 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CHMLP26374 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CHMLP26374 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CHMLP26374 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHMLP26374 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CHMLP26374 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CHMLP26374 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHMLP26374 AC023157.3-201ENST00000619086 2088 ntBASIC19.14■□□□□ 0.65
CHMLP26374 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHMLP26374 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CHMLP26374 MIR1233-2-201ENST00000408138 82 ntBASIC19.14■□□□□ 0.65
CHMLP26374 MIR1233-1-201ENST00000408722 82 ntBASIC19.14■□□□□ 0.65
CHMLP26374 RPL37AP1-201ENST00000412502 279 ntBASIC19.14■□□□□ 0.65
CHMLP26374 TSEN15P1-201ENST00000423257 515 ntBASIC19.14■□□□□ 0.65
CHMLP26374 TARDBPP1-201ENST00000442013 1203 ntBASIC19.14■□□□□ 0.65
CHMLP26374 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC19.14■□□□□ 0.65
CHMLP26374 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHMLP26374 AL589739.1-201ENST00000607720 493 ntBASIC19.14■□□□□ 0.65
CHMLP26374 AL691403.2-201ENST00000618460 490 ntBASIC19.14■□□□□ 0.65
CHMLP26374 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CHMLP26374 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC19.14■□□□□ 0.65
CHMLP26374 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHMLP26374 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHMLP26374 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHMLP26374 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHMLP26374 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHMLP26374 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
CHMLP26374 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
CHMLP26374 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMLP26374 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMLP26374 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMLP26374 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC19.13■□□□□ 0.65
CHMLP26374 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMLP26374 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMLP26374 AC103702.1-201ENST00000548801 2630 ntBASIC19.13■□□□□ 0.65
CHMLP26374 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMLP26374 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC19.13■□□□□ 0.65
CHMLP26374 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CHMLP26374 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMLP26374 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CHMLP26374 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CHMLP26374 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMLP26374 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMLP26374 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CHMLP26374 AC074338.1-201ENST00000416825 156 ntBASIC19.13■□□□□ 0.65
CHMLP26374 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC19.13■□□□□ 0.65
CHMLP26374 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC19.13■□□□□ 0.65
CHMLP26374 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.13■□□□□ 0.65
CHMLP26374 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19.13■□□□□ 0.65
CHMLP26374 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CHMLP26374 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC19.13■□□□□ 0.65
CHMLP26374 GPER1-207ENST00000619052 571 ntTSL 2 BASIC19.13■□□□□ 0.65
CHMLP26374 Z92544.3-201ENST00000624747 417 ntBASIC19.13■□□□□ 0.65
CHMLP26374 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMLP26374 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMLP26374 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms