Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC15.28■□□□□ 0.04
LAMA1P25391 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC15.28■□□□□ 0.04
LAMA1P25391 RN7SL574P-201ENST00000581512 297 ntBASIC15.28■□□□□ 0.04
LAMA1P25391 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC15.28■□□□□ 0.04
LAMA1P25391 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LAMA1P25391 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.28■□□□□ 0.04
LAMA1P25391 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LAMA1P25391 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LAMA1P25391 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LAMA1P25391 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.28■□□□□ 0.04
LAMA1P25391 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
LAMA1P25391 MIR7845-201ENST00000618396 99 ntBASIC15.28■□□□□ 0.04
LAMA1P25391 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LAMA1P25391 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LAMA1P25391 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.28■□□□□ 0.04
LAMA1P25391 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LAMA1P25391 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LAMA1P25391 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.28■□□□□ 0.04
LAMA1P25391 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
LAMA1P25391 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LAMA1P25391 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
LAMA1P25391 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LAMA1P25391 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LAMA1P25391 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LAMA1P25391 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LAMA1P25391 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
LAMA1P25391 AL023775.1-201ENST00000454907 1746 ntBASIC15.27■□□□□ 0.04
LAMA1P25391 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.27■□□□□ 0.04
LAMA1P25391 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LAMA1P25391 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.27■□□□□ 0.04
LAMA1P25391 AC005077.2-201ENST00000449786 690 ntBASIC15.27■□□□□ 0.04
LAMA1P25391 PTK2-225ENST00000520892 571 ntTSL 4 BASIC15.27■□□□□ 0.04
LAMA1P25391 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LAMA1P25391 AC009486.1-201ENST00000569860 813 ntBASIC15.27■□□□□ 0.04
LAMA1P25391 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LAMA1P25391 AC084018.2-201ENST00000613093 2607 ntBASIC15.27■□□□□ 0.03
LAMA1P25391 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.27■□□□□ 0.03
LAMA1P25391 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
LAMA1P25391 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
LAMA1P25391 AC004899.1-201ENST00000424687 1714 ntBASIC15.27■□□□□ 0.03
LAMA1P25391 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LAMA1P25391 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LAMA1P25391 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC15.27■□□□□ 0.03
LAMA1P25391 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC15.27■□□□□ 0.03
LAMA1P25391 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LAMA1P25391 CDK7-214ENST00000626796 358 ntTSL 5 BASIC15.27■□□□□ 0.03
LAMA1P25391 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC15.27■□□□□ 0.03
LAMA1P25391 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC15.27■□□□□ 0.03
LAMA1P25391 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.27■□□□□ 0.03
LAMA1P25391 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.27■□□□□ 0.03
LAMA1P25391 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC15.27■□□□□ 0.03
LAMA1P25391 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.27■□□□□ 0.03
LAMA1P25391 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LAMA1P25391 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LAMA1P25391 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
LAMA1P25391 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LAMA1P25391 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.26■□□□□ 0.03
LAMA1P25391 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LAMA1P25391 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LAMA1P25391 LTB4R2-202ENST00000528054 3092 ntBASIC15.26■□□□□ 0.03
LAMA1P25391 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.26■□□□□ 0.03
LAMA1P25391 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.26■□□□□ 0.03
LAMA1P25391 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC15.26■□□□□ 0.03
LAMA1P25391 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LAMA1P25391 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LAMA1P25391 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LAMA1P25391 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.26■□□□□ 0.03
LAMA1P25391 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
LAMA1P25391 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.26■□□□□ 0.03
LAMA1P25391 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
LAMA1P25391 AC099398.1-201ENST00000567919 2776 ntBASIC15.26■□□□□ 0.03
LAMA1P25391 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LAMA1P25391 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LAMA1P25391 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LAMA1P25391 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC15.26■□□□□ 0.03
LAMA1P25391 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
LAMA1P25391 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.26■□□□□ 0.03
LAMA1P25391 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LAMA1P25391 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LAMA1P25391 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.26■□□□□ 0.03
LAMA1P25391 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC15.26■□□□□ 0.03
LAMA1P25391 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC15.26■□□□□ 0.03
LAMA1P25391 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LAMA1P25391 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.26■□□□□ 0.03
LAMA1P25391 PCDHA14-201ENST00000506751 2298 ntBASIC15.26■□□□□ 0.03
LAMA1P25391 AC006449.6-201ENST00000612330 2296 ntBASIC15.26■□□□□ 0.03
LAMA1P25391 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LAMA1P25391 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LAMA1P25391 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.26■□□□□ 0.03
LAMA1P25391 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
LAMA1P25391 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LAMA1P25391 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LAMA1P25391 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
LAMA1P25391 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LAMA1P25391 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LAMA1P25391 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LAMA1P25391 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.25■□□□□ 0.03
LAMA1P25391 CD8B2-202ENST00000417670 633 ntBASIC15.25■□□□□ 0.03
LAMA1P25391 POM121L10P-201ENST00000436994 1285 ntBASIC15.25■□□□□ 0.03
LAMA1P25391 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms