Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
CD58P19256 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD58P19256 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CD58P19256 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CD58P19256 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.12■□□□□ 0.33
CD58P19256 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD58P19256 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.11■□□□□ 0.33
CD58P19256 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD58P19256 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.11■□□□□ 0.33
CD58P19256 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CD58P19256 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD58P19256 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.11■□□□□ 0.33
CD58P19256 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CD58P19256 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CD58P19256 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.11■□□□□ 0.33
CD58P19256 AL080243.2-201ENST00000418783 582 ntBASIC17.11■□□□□ 0.33
CD58P19256 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.11■□□□□ 0.33
CD58P19256 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.11■□□□□ 0.33
CD58P19256 AC027796.2-201ENST00000575326 344 ntBASIC17.11■□□□□ 0.33
CD58P19256 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.11■□□□□ 0.33
CD58P19256 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.11■□□□□ 0.33
CD58P19256 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CD58P19256 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.11■□□□□ 0.33
CD58P19256 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.11■□□□□ 0.33
CD58P19256 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CD58P19256 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
CD58P19256 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD58P19256 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CD58P19256 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CD58P19256 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CD58P19256 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD58P19256 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.11■□□□□ 0.33
CD58P19256 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD58P19256 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CD58P19256 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD58P19256 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.11■□□□□ 0.33
CD58P19256 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.11■□□□□ 0.33
CD58P19256 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.1■□□□□ 0.33
CD58P19256 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD58P19256 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.1■□□□□ 0.33
CD58P19256 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD58P19256 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.1■□□□□ 0.33
CD58P19256 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.1■□□□□ 0.33
CD58P19256 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
CD58P19256 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CD58P19256 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CD58P19256 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD58P19256 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD58P19256 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CD58P19256 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD58P19256 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.1■□□□□ 0.33
CD58P19256 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.1■□□□□ 0.33
CD58P19256 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.1■□□□□ 0.33
CD58P19256 AC092580.3-201ENST00000430932 139 ntBASIC17.1■□□□□ 0.33
CD58P19256 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.1■□□□□ 0.33
CD58P19256 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CD58P19256 AC097493.3-201ENST00000509725 367 ntBASIC17.1■□□□□ 0.33
CD58P19256 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.1■□□□□ 0.33
CD58P19256 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.1■□□□□ 0.33
CD58P19256 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CD58P19256 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.1■□□□□ 0.33
CD58P19256 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.1■□□□□ 0.33
CD58P19256 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.1■□□□□ 0.33
CD58P19256 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.1■□□□□ 0.33
CD58P19256 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.1■□□□□ 0.33
CD58P19256 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD58P19256 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CD58P19256 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.1■□□□□ 0.33
CD58P19256 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CD58P19256 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CD58P19256 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.1■□□□□ 0.33
CD58P19256 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD58P19256 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD58P19256 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD58P19256 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD58P19256 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD58P19256 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.1■□□□□ 0.33
CD58P19256 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CD58P19256 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD58P19256 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD58P19256 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CD58P19256 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CD58P19256 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD58P19256 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD58P19256 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD58P19256 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD58P19256 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CD58P19256 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
CD58P19256 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD58P19256 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.09■□□□□ 0.33
CD58P19256 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD58P19256 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
CD58P19256 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.09■□□□□ 0.33
CD58P19256 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD58P19256 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CD58P19256 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.09■□□□□ 0.33
CD58P19256 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CD58P19256 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CD58P19256 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CD58P19256 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms