Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DOBP13765 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.3□□□□□ -0.12
HLA-DOBP13765 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.3□□□□□ -0.12
HLA-DOBP13765 AL353705.2-201ENST00000428243 662 ntBASIC14.3□□□□□ -0.12
HLA-DOBP13765 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.3□□□□□ -0.12
HLA-DOBP13765 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.3□□□□□ -0.12
HLA-DOBP13765 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.3□□□□□ -0.12
HLA-DOBP13765 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DOBP13765 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.3□□□□□ -0.12
HLA-DOBP13765 MIR4453-201ENST00000584019 89 ntBASIC14.3□□□□□ -0.12
HLA-DOBP13765 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.3□□□□□ -0.12
HLA-DOBP13765 AL691403.2-201ENST00000618460 490 ntBASIC14.3□□□□□ -0.12
HLA-DOBP13765 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DOBP13765 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
HLA-DOBP13765 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DOBP13765 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.3□□□□□ -0.12
HLA-DOBP13765 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC14.3□□□□□ -0.12
HLA-DOBP13765 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DOBP13765 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DOBP13765 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DOBP13765 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DOBP13765 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.3□□□□□ -0.12
HLA-DOBP13765 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
HLA-DOBP13765 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DOBP13765 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DOBP13765 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.29□□□□□ -0.12
HLA-DOBP13765 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DOBP13765 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.29□□□□□ -0.12
HLA-DOBP13765 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DOBP13765 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
HLA-DOBP13765 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DOBP13765 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.29□□□□□ -0.12
HLA-DOBP13765 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DOBP13765 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.29□□□□□ -0.12
HLA-DOBP13765 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DOBP13765 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
HLA-DOBP13765 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
HLA-DOBP13765 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DOBP13765 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DOBP13765 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DOBP13765 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.29□□□□□ -0.12
HLA-DOBP13765 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DOBP13765 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DOBP13765 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.29□□□□□ -0.12
HLA-DOBP13765 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.29□□□□□ -0.12
HLA-DOBP13765 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.29□□□□□ -0.12
HLA-DOBP13765 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.29□□□□□ -0.12
HLA-DOBP13765 AC026979.3-201ENST00000607315 403 ntBASIC14.29□□□□□ -0.12
HLA-DOBP13765 MIR6080-201ENST00000617359 66 ntBASIC14.29□□□□□ -0.12
HLA-DOBP13765 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.29□□□□□ -0.12
HLA-DOBP13765 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DOBP13765 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DOBP13765 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
HLA-DOBP13765 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DOBP13765 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.29□□□□□ -0.12
HLA-DOBP13765 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
HLA-DOBP13765 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DOBP13765 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DOBP13765 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DOBP13765 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DOBP13765 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DOBP13765 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
HLA-DOBP13765 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.28□□□□□ -0.12
HLA-DOBP13765 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.28□□□□□ -0.12
HLA-DOBP13765 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
HLA-DOBP13765 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DOBP13765 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DOBP13765 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DOBP13765 AL139400.1-201ENST00000366220 510 ntBASIC14.28□□□□□ -0.12
HLA-DOBP13765 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
HLA-DOBP13765 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DOBP13765 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DOBP13765 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DOBP13765 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.28□□□□□ -0.12
HLA-DOBP13765 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.28□□□□□ -0.12
HLA-DOBP13765 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
HLA-DOBP13765 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DOBP13765 KRT8P37-201ENST00000451609 1420 ntBASIC14.28□□□□□ -0.12
HLA-DOBP13765 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.28□□□□□ -0.12
HLA-DOBP13765 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.28□□□□□ -0.12
HLA-DOBP13765 AC109322.1-201ENST00000524499 1264 ntBASIC14.28□□□□□ -0.12
HLA-DOBP13765 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
HLA-DOBP13765 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.28□□□□□ -0.12
HLA-DOBP13765 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.28□□□□□ -0.12
HLA-DOBP13765 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.28□□□□□ -0.12
HLA-DOBP13765 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.28□□□□□ -0.12
HLA-DOBP13765 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.28□□□□□ -0.12
HLA-DOBP13765 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DOBP13765 AP001059.3-201ENST00000619053 235 ntBASIC14.28□□□□□ -0.12
HLA-DOBP13765 LINC00628-201ENST00000628516 1289 ntBASIC14.28□□□□□ -0.12
HLA-DOBP13765 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
HLA-DOBP13765 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DOBP13765 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.28□□□□□ -0.12
HLA-DOBP13765 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
HLA-DOBP13765 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DOBP13765 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DOBP13765 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.28□□□□□ -0.12
HLA-DOBP13765 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
HLA-DOBP13765 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.27□□□□□ -0.12
HLA-DOBP13765 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms