Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTPRFP10586 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PTPRFP10586 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTPRFP10586 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTPRFP10586 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PTPRFP10586 AL139094.1-201ENST00000405549 1188 ntBASIC17.9■□□□□ 0.46
PTPRFP10586 KRTAP10-13P-201ENST00000412914 571 ntBASIC17.9■□□□□ 0.46
PTPRFP10586 RGS5-214ENST00000429865 754 ntTSL 3 BASIC17.9■□□□□ 0.46
PTPRFP10586 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.9■□□□□ 0.46
PTPRFP10586 AC013355.1-201ENST00000562625 723 ntBASIC17.9■□□□□ 0.46
PTPRFP10586 PPY2P-201ENST00000582808 702 ntBASIC17.9■□□□□ 0.46
PTPRFP10586 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PTPRFP10586 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
PTPRFP10586 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.9■□□□□ 0.46
PTPRFP10586 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTPRFP10586 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTPRFP10586 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTPRFP10586 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
PTPRFP10586 AL158070.2-201ENST00000623713 1621 ntBASIC17.89■□□□□ 0.45
PTPRFP10586 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PTPRFP10586 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.89■□□□□ 0.45
PTPRFP10586 KRT8P19-201ENST00000551916 1455 ntBASIC17.89■□□□□ 0.45
PTPRFP10586 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PTPRFP10586 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTPRFP10586 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC17.89■□□□□ 0.45
PTPRFP10586 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTPRFP10586 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
PTPRFP10586 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PTPRFP10586 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTPRFP10586 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
PTPRFP10586 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC17.89■□□□□ 0.45
PTPRFP10586 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PTPRFP10586 AC023310.1-201ENST00000554836 735 ntBASIC17.89■□□□□ 0.45
PTPRFP10586 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC17.89■□□□□ 0.45
PTPRFP10586 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC17.89■□□□□ 0.45
PTPRFP10586 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC17.89■□□□□ 0.45
PTPRFP10586 AL451050.2-201ENST00000606967 682 ntBASIC17.89■□□□□ 0.45
PTPRFP10586 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PTPRFP10586 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.89■□□□□ 0.45
PTPRFP10586 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTPRFP10586 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTPRFP10586 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.89■□□□□ 0.45
PTPRFP10586 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTPRFP10586 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTPRFP10586 LRRC59-203ENST00000576448 1531 ntBASIC17.89■□□□□ 0.45
PTPRFP10586 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PTPRFP10586 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PTPRFP10586 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTPRFP10586 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTPRFP10586 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTPRFP10586 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC17.88■□□□□ 0.45
PTPRFP10586 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
PTPRFP10586 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPRFP10586 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPRFP10586 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PTPRFP10586 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
PTPRFP10586 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.88■□□□□ 0.45
PTPRFP10586 DEF8-202ENST00000418391 852 ntTSL 2 BASIC17.88■□□□□ 0.45
PTPRFP10586 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
PTPRFP10586 POM121L10P-201ENST00000436994 1285 ntBASIC17.88■□□□□ 0.45
PTPRFP10586 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC17.88■□□□□ 0.45
PTPRFP10586 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PTPRFP10586 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC17.88■□□□□ 0.45
PTPRFP10586 RNA5SP486-201ENST00000515961 83 ntBASIC17.88■□□□□ 0.45
PTPRFP10586 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PTPRFP10586 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PTPRFP10586 MIR3619-201ENST00000579667 83 ntBASIC17.88■□□□□ 0.45
PTPRFP10586 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.88■□□□□ 0.45
PTPRFP10586 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.88■□□□□ 0.45
PTPRFP10586 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PTPRFP10586 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC17.88■□□□□ 0.45
PTPRFP10586 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.88■□□□□ 0.45
PTPRFP10586 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC17.88■□□□□ 0.45
PTPRFP10586 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PTPRFP10586 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.88■□□□□ 0.45
PTPRFP10586 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
PTPRFP10586 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPRFP10586 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PTPRFP10586 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPRFP10586 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPRFP10586 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPRFP10586 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPRFP10586 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPRFP10586 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PTPRFP10586 AP001258.2-201ENST00000529891 490 ntBASIC17.88■□□□□ 0.45
PTPRFP10586 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC17.88■□□□□ 0.45
PTPRFP10586 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC17.88■□□□□ 0.45
PTPRFP10586 AC020914.3-201ENST00000594712 304 ntBASIC17.88■□□□□ 0.45
PTPRFP10586 AC138649.2-201ENST00000615886 705 ntBASIC17.88■□□□□ 0.45
PTPRFP10586 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPRFP10586 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPRFP10586 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPRFP10586 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
PTPRFP10586 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPRFP10586 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTPRFP10586 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
PTPRFP10586 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTPRFP10586 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.87■□□□□ 0.45
PTPRFP10586 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.87■□□□□ 0.45
PTPRFP10586 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms