Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
FREM3P0C091 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.44□□□□□ -0.1
FREM3P0C091 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.44□□□□□ -0.1
FREM3P0C091 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.44□□□□□ -0.1
FREM3P0C091 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
FREM3P0C091 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
FREM3P0C091 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FREM3P0C091 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FREM3P0C091 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
FREM3P0C091 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FREM3P0C091 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
FREM3P0C091 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
FREM3P0C091 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FREM3P0C091 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FREM3P0C091 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.44□□□□□ -0.1
FREM3P0C091 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.44□□□□□ -0.1
FREM3P0C091 MIR4745-201ENST00000577608 62 ntBASIC14.44□□□□□ -0.1
FREM3P0C091 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.44□□□□□ -0.1
FREM3P0C091 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.44□□□□□ -0.1
FREM3P0C091 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.44□□□□□ -0.1
FREM3P0C091 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FREM3P0C091 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
FREM3P0C091 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
FREM3P0C091 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
FREM3P0C091 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
FREM3P0C091 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
FREM3P0C091 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FREM3P0C091 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.44□□□□□ -0.1
FREM3P0C091 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FREM3P0C091 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FREM3P0C091 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
FREM3P0C091 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
FREM3P0C091 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FREM3P0C091 Z97205.2-201ENST00000564697 1639 ntBASIC14.44□□□□□ -0.1
FREM3P0C091 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.44□□□□□ -0.1
FREM3P0C091 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
FREM3P0C091 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.44□□□□□ -0.1
FREM3P0C091 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
FREM3P0C091 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
FREM3P0C091 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.44□□□□□ -0.1
FREM3P0C091 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
FREM3P0C091 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
FREM3P0C091 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FREM3P0C091 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
FREM3P0C091 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
FREM3P0C091 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.44□□□□□ -0.1
FREM3P0C091 PHKG1P2-201ENST00000457537 863 ntBASIC14.44□□□□□ -0.1
FREM3P0C091 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.44□□□□□ -0.1
FREM3P0C091 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.44□□□□□ -0.1
FREM3P0C091 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.44□□□□□ -0.1
FREM3P0C091 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.44□□□□□ -0.1
FREM3P0C091 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.44□□□□□ -0.1
FREM3P0C091 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.44□□□□□ -0.1
FREM3P0C091 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FREM3P0C091 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.43□□□□□ -0.1
FREM3P0C091 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FREM3P0C091 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
FREM3P0C091 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.43□□□□□ -0.1
FREM3P0C091 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
FREM3P0C091 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.43□□□□□ -0.1
FREM3P0C091 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FREM3P0C091 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
FREM3P0C091 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FREM3P0C091 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
FREM3P0C091 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
FREM3P0C091 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
FREM3P0C091 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
FREM3P0C091 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
FREM3P0C091 MIR648-201ENST00000385046 94 ntBASIC14.43□□□□□ -0.1
FREM3P0C091 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.43□□□□□ -0.1
FREM3P0C091 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.43□□□□□ -0.1
FREM3P0C091 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.43□□□□□ -0.1
FREM3P0C091 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.43□□□□□ -0.1
FREM3P0C091 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FREM3P0C091 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
FREM3P0C091 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
FREM3P0C091 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.43□□□□□ -0.1
FREM3P0C091 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FREM3P0C091 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
FREM3P0C091 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
FREM3P0C091 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
FREM3P0C091 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
FREM3P0C091 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
FREM3P0C091 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
FREM3P0C091 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
FREM3P0C091 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FREM3P0C091 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FREM3P0C091 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.43□□□□□ -0.1
FREM3P0C091 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
FREM3P0C091 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FREM3P0C091 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
FREM3P0C091 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FREM3P0C091 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.42□□□□□ -0.1
FREM3P0C091 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
FREM3P0C091 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FREM3P0C091 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.42□□□□□ -0.1
FREM3P0C091 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
FREM3P0C091 SPTLC1P1-201ENST00000447199 261 ntBASIC14.42□□□□□ -0.1
FREM3P0C091 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
FREM3P0C091 AC023310.3-201ENST00000557027 670 ntBASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms