Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CXCL1P09341 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CXCL1P09341 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CXCL1P09341 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC12.41□□□□□ -0.42
CXCL1P09341 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CXCL1P09341 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC12.41□□□□□ -0.42
CXCL1P09341 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC12.41□□□□□ -0.42
CXCL1P09341 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
CXCL1P09341 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CXCL1P09341 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC12.41□□□□□ -0.42
CXCL1P09341 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CXCL1P09341 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
CXCL1P09341 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CXCL1P09341 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC12.41□□□□□ -0.42
CXCL1P09341 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
CXCL1P09341 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC12.41□□□□□ -0.42
CXCL1P09341 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CXCL1P09341 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC12.41□□□□□ -0.42
CXCL1P09341 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CXCL1P09341 AC126335.2-201ENST00000623362 4637 ntBASIC12.41□□□□□ -0.42
CXCL1P09341 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC12.41□□□□□ -0.42
CXCL1P09341 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CXCL1P09341 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
CXCL1P09341 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
CXCL1P09341 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC12.41□□□□□ -0.42
CXCL1P09341 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC12.41□□□□□ -0.42
CXCL1P09341 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CXCL1P09341 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CXCL1P09341 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC12.41□□□□□ -0.42
CXCL1P09341 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CXCL1P09341 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC12.41□□□□□ -0.42
CXCL1P09341 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CXCL1P09341 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CXCL1P09341 AC087499.1-201ENST00000418141 1075 ntBASIC12.41□□□□□ -0.42
CXCL1P09341 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CXCL1P09341 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CXCL1P09341 AL137013.1-201ENST00000432946 1228 ntBASIC12.41□□□□□ -0.42
CXCL1P09341 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CXCL1P09341 NUS1P1-201ENST00000446295 882 ntBASIC12.41□□□□□ -0.42
CXCL1P09341 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CXCL1P09341 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CXCL1P09341 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC12.41□□□□□ -0.42
CXCL1P09341 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CXCL1P09341 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC12.41□□□□□ -0.42
CXCL1P09341 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CXCL1P09341 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC12.41□□□□□ -0.42
CXCL1P09341 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CXCL1P09341 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
CXCL1P09341 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CXCL1P09341 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CXCL1P09341 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CXCL1P09341 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
CXCL1P09341 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CXCL1P09341 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
CXCL1P09341 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CXCL1P09341 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC12.41□□□□□ -0.42
CXCL1P09341 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CXCL1P09341 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
CXCL1P09341 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CXCL1P09341 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CXCL1P09341 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
CXCL1P09341 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC12.4□□□□□ -0.42
CXCL1P09341 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CXCL1P09341 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC12.4□□□□□ -0.42
CXCL1P09341 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC12.4□□□□□ -0.42
CXCL1P09341 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.4□□□□□ -0.42
CXCL1P09341 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CXCL1P09341 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC12.4□□□□□ -0.42
CXCL1P09341 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
CXCL1P09341 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CXCL1P09341 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC12.4□□□□□ -0.42
CXCL1P09341 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
CXCL1P09341 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CXCL1P09341 INTS4P1-203ENST00000641008 3683 ntBASIC12.4□□□□□ -0.42
CXCL1P09341 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CXCL1P09341 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CXCL1P09341 AC092135.3-201ENST00000624151 1846 ntBASIC12.4□□□□□ -0.42
CXCL1P09341 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
CXCL1P09341 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CXCL1P09341 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC12.4□□□□□ -0.42
CXCL1P09341 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
CXCL1P09341 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC12.4□□□□□ -0.42
CXCL1P09341 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CXCL1P09341 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CXCL1P09341 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CXCL1P09341 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC12.4□□□□□ -0.42
CXCL1P09341 AL645929.1-201ENST00000420084 975 ntBASIC12.4□□□□□ -0.42
CXCL1P09341 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC12.4□□□□□ -0.42
CXCL1P09341 TSPY22P-201ENST00000427496 604 ntBASIC12.4□□□□□ -0.42
CXCL1P09341 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CXCL1P09341 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC12.4□□□□□ -0.42
CXCL1P09341 CLN6-204ENST00000564752 900 ntTSL 3 BASIC12.4□□□□□ -0.42
CXCL1P09341 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC12.4□□□□□ -0.42
CXCL1P09341 AC005363.2-201ENST00000618631 242 ntBASIC12.4□□□□□ -0.42
CXCL1P09341 CLN6-214ENST00000636314 442 ntTSL 3 BASIC12.4□□□□□ -0.42
CXCL1P09341 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
CXCL1P09341 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CXCL1P09341 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC12.4□□□□□ -0.42
CXCL1P09341 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CXCL1P09341 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms