Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RETP07949 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RETP07949 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RETP07949 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.05■□□□□ 0.16
RETP07949 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RETP07949 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
RETP07949 CROCCP1-201ENST00000426910 5675 ntBASIC16.04■□□□□ 0.16
RETP07949 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RETP07949 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
RETP07949 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
RETP07949 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC16.04■□□□□ 0.16
RETP07949 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RETP07949 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RETP07949 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RETP07949 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RETP07949 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
RETP07949 KRT8P22-201ENST00000562317 1415 ntBASIC16.04■□□□□ 0.16
RETP07949 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.04■□□□□ 0.16
RETP07949 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RETP07949 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RETP07949 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RETP07949 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RETP07949 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RETP07949 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.04■□□□□ 0.16
RETP07949 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
RETP07949 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RETP07949 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RETP07949 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
RETP07949 ACTG1P3-201ENST00000431775 1114 ntBASIC16.04■□□□□ 0.16
RETP07949 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.04■□□□□ 0.16
RETP07949 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC16.04■□□□□ 0.16
RETP07949 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC16.04■□□□□ 0.16
RETP07949 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.04■□□□□ 0.16
RETP07949 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
RETP07949 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
RETP07949 EMC4-209ENST00000559421 497 ntTSL 2 BASIC16.04■□□□□ 0.16
RETP07949 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.04■□□□□ 0.16
RETP07949 AC061975.2-201ENST00000581722 295 ntBASIC16.04■□□□□ 0.16
RETP07949 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.04■□□□□ 0.16
RETP07949 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
RETP07949 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.04■□□□□ 0.16
RETP07949 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RETP07949 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RETP07949 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
RETP07949 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
RETP07949 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
RETP07949 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RETP07949 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.04■□□□□ 0.16
RETP07949 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
RETP07949 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
RETP07949 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
RETP07949 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RETP07949 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.03■□□□□ 0.16
RETP07949 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RETP07949 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RETP07949 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
RETP07949 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
RETP07949 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RETP07949 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
RETP07949 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RETP07949 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
RETP07949 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
RETP07949 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RETP07949 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.03■□□□□ 0.16
RETP07949 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RETP07949 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RETP07949 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.03■□□□□ 0.16
RETP07949 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RETP07949 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.03■□□□□ 0.16
RETP07949 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RETP07949 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.03■□□□□ 0.16
RETP07949 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
RETP07949 GZMB-202ENST00000382540 816 ntTSL 5 BASIC16.03■□□□□ 0.16
RETP07949 MIR1247-201ENST00000408206 136 ntBASIC16.03■□□□□ 0.16
RETP07949 GPAA1P2-201ENST00000417923 928 ntBASIC16.03■□□□□ 0.16
RETP07949 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.03■□□□□ 0.16
RETP07949 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.03■□□□□ 0.16
RETP07949 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC16.03■□□□□ 0.16
RETP07949 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC16.03■□□□□ 0.16
RETP07949 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.03■□□□□ 0.16
RETP07949 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.03■□□□□ 0.16
RETP07949 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.03■□□□□ 0.16
RETP07949 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.03■□□□□ 0.16
RETP07949 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.03■□□□□ 0.16
RETP07949 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.03■□□□□ 0.16
RETP07949 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC16.03■□□□□ 0.16
RETP07949 AC243960.2-201ENST00000600996 747 ntBASIC16.03■□□□□ 0.16
RETP07949 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RETP07949 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RETP07949 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RETP07949 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RETP07949 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RETP07949 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RETP07949 MTHFR-217ENST00000641820 1569 ntBASIC16.03■□□□□ 0.16
RETP07949 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RETP07949 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
RETP07949 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RETP07949 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
RETP07949 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.02■□□□□ 0.16
RETP07949 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms