Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COL5A2P05997 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC20.5■□□□□ 0.87
COL5A2P05997 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC20.5■□□□□ 0.87
COL5A2P05997 OR10B1P-201ENST00000601666 907 ntBASIC20.5■□□□□ 0.87
COL5A2P05997 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
COL5A2P05997 AC022748.3-201ENST00000621828 275 ntBASIC20.5■□□□□ 0.87
COL5A2P05997 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC20.5■□□□□ 0.87
COL5A2P05997 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC20.5■□□□□ 0.87
COL5A2P05997 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COL5A2P05997 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL5A2P05997 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL5A2P05997 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COL5A2P05997 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL5A2P05997 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COL5A2P05997 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL5A2P05997 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL5A2P05997 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL5A2P05997 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC20.5■□□□□ 0.87
COL5A2P05997 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL5A2P05997 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
COL5A2P05997 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL5A2P05997 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC20.5■□□□□ 0.87
COL5A2P05997 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
COL5A2P05997 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC20.5■□□□□ 0.87
COL5A2P05997 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COL5A2P05997 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COL5A2P05997 TUBBP5-203ENST00000508529 1334 ntBASIC20.5■□□□□ 0.87
COL5A2P05997 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL5A2P05997 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
COL5A2P05997 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC20.5■□□□□ 0.87
COL5A2P05997 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC20.5■□□□□ 0.87
COL5A2P05997 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC20.5■□□□□ 0.87
COL5A2P05997 NUP210P1-202ENST00000504322 710 ntBASIC20.5■□□□□ 0.87
COL5A2P05997 AC024681.1-201ENST00000521917 487 ntBASIC20.5■□□□□ 0.87
COL5A2P05997 MIR3907-201ENST00000579424 151 ntBASIC20.5■□□□□ 0.87
COL5A2P05997 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC20.5■□□□□ 0.87
COL5A2P05997 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC20.5■□□□□ 0.87
COL5A2P05997 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
COL5A2P05997 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
COL5A2P05997 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL5A2P05997 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.49■□□□□ 0.87
COL5A2P05997 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
COL5A2P05997 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL5A2P05997 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COL5A2P05997 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC20.49■□□□□ 0.87
COL5A2P05997 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL5A2P05997 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL5A2P05997 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC20.49■□□□□ 0.87
COL5A2P05997 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL5A2P05997 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL5A2P05997 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL5A2P05997 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL5A2P05997 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL5A2P05997 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL5A2P05997 CRCP-204ENST00000398684 492 ntTSL 2 BASIC20.49■□□□□ 0.87
COL5A2P05997 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC20.49■□□□□ 0.87
COL5A2P05997 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC20.49■□□□□ 0.87
COL5A2P05997 PRKXP1-201ENST00000561423 1122 ntBASIC20.49■□□□□ 0.87
COL5A2P05997 AC013355.1-201ENST00000562625 723 ntBASIC20.49■□□□□ 0.87
COL5A2P05997 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC20.49■□□□□ 0.87
COL5A2P05997 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC20.49■□□□□ 0.87
COL5A2P05997 AL133499.1-201ENST00000596207 608 ntBASIC20.49■□□□□ 0.87
COL5A2P05997 AF254983.2-201ENST00000612331 135 ntBASIC20.49■□□□□ 0.87
COL5A2P05997 AC091544.8-201ENST00000619490 361 ntBASIC20.49■□□□□ 0.87
COL5A2P05997 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COL5A2P05997 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC20.49■□□□□ 0.87
COL5A2P05997 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL5A2P05997 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
COL5A2P05997 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL5A2P05997 ANKRD30BP2-201ENST00000435744 1610 ntBASIC20.48■□□□□ 0.87
COL5A2P05997 AMT-224ENST00000635808 1610 ntTSL 5 BASIC20.48■□□□□ 0.87
COL5A2P05997 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL5A2P05997 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC20.48■□□□□ 0.87
COL5A2P05997 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
COL5A2P05997 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC20.48■□□□□ 0.87
COL5A2P05997 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL5A2P05997 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC20.48■□□□□ 0.87
COL5A2P05997 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC20.48■□□□□ 0.87
COL5A2P05997 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL5A2P05997 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL5A2P05997 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC20.48■□□□□ 0.87
COL5A2P05997 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
COL5A2P05997 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC20.48■□□□□ 0.87
COL5A2P05997 CHMP1AP1-201ENST00000445563 662 ntBASIC20.48■□□□□ 0.87
COL5A2P05997 MAGEA5-201ENST00000446757 942 ntBASIC20.48■□□□□ 0.87
COL5A2P05997 AL133466.1-201ENST00000447582 150 ntBASIC20.48■□□□□ 0.87
COL5A2P05997 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
COL5A2P05997 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
COL5A2P05997 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC20.48■□□□□ 0.87
COL5A2P05997 RN7SL774P-201ENST00000577467 290 ntBASIC20.48■□□□□ 0.87
COL5A2P05997 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC20.48■□□□□ 0.87
COL5A2P05997 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC20.48■□□□□ 0.87
COL5A2P05997 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
COL5A2P05997 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL5A2P05997 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC20.48■□□□□ 0.87
COL5A2P05997 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL5A2P05997 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL5A2P05997 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
COL5A2P05997 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
COL5A2P05997 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms