Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD3DP04234 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.57□□□□□ -0.24
CD3DP04234 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CD3DP04234 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
CD3DP04234 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.57□□□□□ -0.24
CD3DP04234 CYP51A1P2-201ENST00000419457 1499 ntBASIC13.57□□□□□ -0.24
CD3DP04234 AP001282.1-201ENST00000531301 1499 ntBASIC13.57□□□□□ -0.24
CD3DP04234 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD3DP04234 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CD3DP04234 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CD3DP04234 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.57□□□□□ -0.24
CD3DP04234 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD3DP04234 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD3DP04234 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD3DP04234 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC13.57□□□□□ -0.24
CD3DP04234 AL031133.1-201ENST00000406807 723 ntBASIC13.57□□□□□ -0.24
CD3DP04234 ELK2BP-201ENST00000415014 1224 ntBASIC13.57□□□□□ -0.24
CD3DP04234 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
CD3DP04234 AC093724.1-201ENST00000448659 1027 ntBASIC13.57□□□□□ -0.24
CD3DP04234 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD3DP04234 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CD3DP04234 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC13.57□□□□□ -0.24
CD3DP04234 MSRA-206ENST00000521209 814 ntTSL 3 BASIC13.57□□□□□ -0.24
CD3DP04234 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CD3DP04234 FICD-205ENST00000552758 603 ntTSL 2 BASIC13.57□□□□□ -0.24
CD3DP04234 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC13.57□□□□□ -0.24
CD3DP04234 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC13.57□□□□□ -0.24
CD3DP04234 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
CD3DP04234 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD3DP04234 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CD3DP04234 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.57□□□□□ -0.24
CD3DP04234 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD3DP04234 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.57□□□□□ -0.24
CD3DP04234 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CD3DP04234 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD3DP04234 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC13.57□□□□□ -0.24
CD3DP04234 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.57□□□□□ -0.24
CD3DP04234 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.57□□□□□ -0.24
CD3DP04234 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD3DP04234 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.57□□□□□ -0.24
CD3DP04234 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD3DP04234 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.56□□□□□ -0.24
CD3DP04234 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD3DP04234 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.56□□□□□ -0.24
CD3DP04234 AC005840.4-201ENST00000541242 2494 ntBASIC13.56□□□□□ -0.24
CD3DP04234 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.56□□□□□ -0.24
CD3DP04234 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD3DP04234 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
CD3DP04234 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD3DP04234 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD3DP04234 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CD3DP04234 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD3DP04234 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CD3DP04234 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.56□□□□□ -0.24
CD3DP04234 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD3DP04234 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.56□□□□□ -0.24
CD3DP04234 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.56□□□□□ -0.24
CD3DP04234 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC13.56□□□□□ -0.24
CD3DP04234 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
CD3DP04234 RBM17P3-201ENST00000417687 1192 ntBASIC13.56□□□□□ -0.24
CD3DP04234 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD3DP04234 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC13.56□□□□□ -0.24
CD3DP04234 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD3DP04234 KRT16P4-201ENST00000453883 522 ntBASIC13.56□□□□□ -0.24
CD3DP04234 FAM86EP-206ENST00000510506 987 ntBASIC13.56□□□□□ -0.24
CD3DP04234 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC13.56□□□□□ -0.24
CD3DP04234 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC13.56□□□□□ -0.24
CD3DP04234 RNF151-202ENST00000569210 853 ntTSL 2 BASIC13.56□□□□□ -0.24
CD3DP04234 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC13.56□□□□□ -0.24
CD3DP04234 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC13.56□□□□□ -0.24
CD3DP04234 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC13.56□□□□□ -0.24
CD3DP04234 MTDHP4-201ENST00000600287 670 ntBASIC13.56□□□□□ -0.24
CD3DP04234 AL365330.1-201ENST00000607459 531 ntBASIC13.56□□□□□ -0.24
CD3DP04234 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CD3DP04234 GGTLC5P-201ENST00000617623 998 ntBASIC13.56□□□□□ -0.24
CD3DP04234 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD3DP04234 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.56□□□□□ -0.24
CD3DP04234 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD3DP04234 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD3DP04234 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD3DP04234 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.56□□□□□ -0.24
CD3DP04234 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CD3DP04234 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD3DP04234 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD3DP04234 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD3DP04234 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
CD3DP04234 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CD3DP04234 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD3DP04234 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CD3DP04234 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC13.55□□□□□ -0.24
CD3DP04234 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.55□□□□□ -0.24
CD3DP04234 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CD3DP04234 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD3DP04234 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD3DP04234 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.55□□□□□ -0.24
CD3DP04234 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD3DP04234 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.55□□□□□ -0.24
CD3DP04234 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CD3DP04234 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD3DP04234 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms