Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 AP005117.1-202ENST00000581724 1908 ntBASIC12.32□□□□□ -0.44
TRBV12-3P01733 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TRBV12-3P01733 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRBV12-3P01733 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRBV12-3P01733 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRBV12-3P01733 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
TRBV12-3P01733 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRBV12-3P01733 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC12.32□□□□□ -0.44
TRBV12-3P01733 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRBV12-3P01733 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC12.32□□□□□ -0.44
TRBV12-3P01733 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
TRBV12-3P01733 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRBV12-3P01733 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC12.32□□□□□ -0.44
TRBV12-3P01733 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TRBV12-3P01733 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRBV12-3P01733 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRBV12-3P01733 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC12.32□□□□□ -0.44
TRBV12-3P01733 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRBV12-3P01733 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TRBV12-3P01733 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRBV12-3P01733 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
TRBV12-3P01733 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC12.31□□□□□ -0.44
TRBV12-3P01733 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRBV12-3P01733 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC12.31□□□□□ -0.44
TRBV12-3P01733 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
TRBV12-3P01733 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
TRBV12-3P01733 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
TRBV12-3P01733 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
TRBV12-3P01733 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRBV12-3P01733 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRBV12-3P01733 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC12.31□□□□□ -0.44
TRBV12-3P01733 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRBV12-3P01733 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRBV12-3P01733 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TRBV12-3P01733 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRBV12-3P01733 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC12.31□□□□□ -0.44
TRBV12-3P01733 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRBV12-3P01733 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC12.31□□□□□ -0.44
TRBV12-3P01733 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC12.31□□□□□ -0.44
TRBV12-3P01733 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRBV12-3P01733 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRBV12-3P01733 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRBV12-3P01733 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRBV12-3P01733 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRBV12-3P01733 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC12.31□□□□□ -0.44
TRBV12-3P01733 CICP6-201ENST00000457191 2729 ntBASIC12.31□□□□□ -0.44
TRBV12-3P01733 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRBV12-3P01733 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRBV12-3P01733 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRBV12-3P01733 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TRBV12-3P01733 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC12.31□□□□□ -0.44
TRBV12-3P01733 CENPM-206ENST00000407253 818 ntTSL 2 BASIC12.31□□□□□ -0.44
TRBV12-3P01733 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC12.31□□□□□ -0.44
TRBV12-3P01733 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC12.31□□□□□ -0.44
TRBV12-3P01733 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC12.31□□□□□ -0.44
TRBV12-3P01733 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC12.31□□□□□ -0.44
TRBV12-3P01733 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC12.31□□□□□ -0.44
TRBV12-3P01733 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC12.31□□□□□ -0.44
TRBV12-3P01733 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC12.31□□□□□ -0.44
TRBV12-3P01733 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC12.31□□□□□ -0.44
TRBV12-3P01733 MPI-209ENST00000564003 1195 ntTSL 2 BASIC12.31□□□□□ -0.44
TRBV12-3P01733 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC12.31□□□□□ -0.44
TRBV12-3P01733 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
TRBV12-3P01733 AL590560.3-201ENST00000623350 461 ntBASIC12.31□□□□□ -0.44
TRBV12-3P01733 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC12.31□□□□□ -0.44
TRBV12-3P01733 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
TRBV12-3P01733 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC12.31□□□□□ -0.44
TRBV12-3P01733 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
TRBV12-3P01733 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRBV12-3P01733 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRBV12-3P01733 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRBV12-3P01733 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRBV12-3P01733 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRBV12-3P01733 CICP13-201ENST00000422015 2789 ntBASIC12.31□□□□□ -0.44
TRBV12-3P01733 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC12.31□□□□□ -0.44
TRBV12-3P01733 AC022188.1-201ENST00000620960 1664 ntBASIC12.31□□□□□ -0.44
TRBV12-3P01733 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC12.31□□□□□ -0.44
TRBV12-3P01733 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TRBV12-3P01733 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TRBV12-3P01733 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRBV12-3P01733 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC12.31□□□□□ -0.44
TRBV12-3P01733 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
TRBV12-3P01733 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TRBV12-3P01733 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRBV12-3P01733 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
TRBV12-3P01733 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC12.3□□□□□ -0.44
TRBV12-3P01733 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
TRBV12-3P01733 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRBV12-3P01733 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TRBV12-3P01733 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRBV12-3P01733 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC12.3□□□□□ -0.44
TRBV12-3P01733 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRBV12-3P01733 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
TRBV12-3P01733 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TRBV12-3P01733 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRBV12-3P01733 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRBV12-3P01733 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TRBV12-3P01733 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC12.3□□□□□ -0.44
TRBV12-3P01733 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC12.3□□□□□ -0.44
TRBV12-3P01733 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms