Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC17.11■□□□□ 0.33
CSPG5O95196 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSPG5O95196 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CSPG5O95196 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
CSPG5O95196 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSPG5O95196 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
CSPG5O95196 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CSPG5O95196 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSPG5O95196 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.11■□□□□ 0.33
CSPG5O95196 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSPG5O95196 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.11■□□□□ 0.33
CSPG5O95196 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.11■□□□□ 0.33
CSPG5O95196 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSPG5O95196 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CSPG5O95196 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CSPG5O95196 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSPG5O95196 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC17.11■□□□□ 0.33
CSPG5O95196 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CSPG5O95196 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
CSPG5O95196 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSPG5O95196 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSPG5O95196 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CSPG5O95196 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSPG5O95196 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSPG5O95196 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSPG5O95196 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSPG5O95196 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSPG5O95196 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.1■□□□□ 0.33
CSPG5O95196 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CSPG5O95196 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSPG5O95196 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CSPG5O95196 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSPG5O95196 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC17.1■□□□□ 0.33
CSPG5O95196 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC17.1■□□□□ 0.33
CSPG5O95196 HIST3H2BA-201ENST00000436555 524 ntBASIC17.1■□□□□ 0.33
CSPG5O95196 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC17.1■□□□□ 0.33
CSPG5O95196 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC17.1■□□□□ 0.33
CSPG5O95196 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.1■□□□□ 0.33
CSPG5O95196 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CSPG5O95196 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC17.1■□□□□ 0.33
CSPG5O95196 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC17.1■□□□□ 0.33
CSPG5O95196 AC036164.1-201ENST00000570544 333 ntBASIC17.1■□□□□ 0.33
CSPG5O95196 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.1■□□□□ 0.33
CSPG5O95196 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CSPG5O95196 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSPG5O95196 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSPG5O95196 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSPG5O95196 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.1■□□□□ 0.33
CSPG5O95196 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSPG5O95196 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CSPG5O95196 KRT8P22-201ENST00000562317 1415 ntBASIC17.1■□□□□ 0.33
CSPG5O95196 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.1■□□□□ 0.33
CSPG5O95196 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSPG5O95196 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CSPG5O95196 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.1■□□□□ 0.33
CSPG5O95196 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.1■□□□□ 0.33
CSPG5O95196 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CSPG5O95196 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSPG5O95196 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSPG5O95196 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.1■□□□□ 0.33
CSPG5O95196 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSPG5O95196 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CSPG5O95196 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSPG5O95196 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CSPG5O95196 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSPG5O95196 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
CSPG5O95196 LBX2-201ENST00000341396 886 ntTSL 3 BASIC17.09■□□□□ 0.33
CSPG5O95196 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CSPG5O95196 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSPG5O95196 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSPG5O95196 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CSPG5O95196 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC17.09■□□□□ 0.33
CSPG5O95196 USB1-202ENST00000423271 1217 ntTSL 2 BASIC17.09■□□□□ 0.33
CSPG5O95196 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CSPG5O95196 RN7SL399P-201ENST00000471648 279 ntBASIC17.09■□□□□ 0.33
CSPG5O95196 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC17.09■□□□□ 0.33
CSPG5O95196 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC17.09■□□□□ 0.33
CSPG5O95196 AL583810.1-201ENST00000553344 1045 ntBASIC17.09■□□□□ 0.33
CSPG5O95196 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC17.09■□□□□ 0.33
CSPG5O95196 MIR5189-201ENST00000577370 114 ntBASIC17.09■□□□□ 0.33
CSPG5O95196 AL158212.4-201ENST00000624062 1286 ntBASIC17.09■□□□□ 0.33
CSPG5O95196 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC17.09■□□□□ 0.33
CSPG5O95196 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSPG5O95196 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSPG5O95196 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.09■□□□□ 0.33
CSPG5O95196 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSPG5O95196 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSPG5O95196 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSPG5O95196 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CSPG5O95196 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.09■□□□□ 0.33
CSPG5O95196 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CSPG5O95196 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSPG5O95196 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CSPG5O95196 U82695.1-201ENST00000635752 1889 ntBASIC17.09■□□□□ 0.33
CSPG5O95196 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.09■□□□□ 0.33
CSPG5O95196 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.09■□□□□ 0.33
CSPG5O95196 AC005915.1-201ENST00000624912 2018 ntBASIC17.09■□□□□ 0.33
CSPG5O95196 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CSPG5O95196 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.09■□□□□ 0.33
CSPG5O95196 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms